C. porcellus Gene: SLC39A8 - ENSCPOG00000003883 - Cavia porcellus (guinea pig)

General information

Ensembl IDENSCPOG00000003883
NameSLC39A8
Descriptionsolute carrier family 39 (zinc transporter), member 8 [Source:HGNC Symbol;Acc:HGNC:20862]
OrganismCavia porcellus (guinea pig)
Synonym(s)bigm103
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
2.07e3
  • 2.07e3
89.45
  • 89.45
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
3.09e3
  • 3.09e3
84.27
  • 84.27
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
4.58e3
  • 4.58e3
76.69
  • 76.69
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0018241prime adult stage
4.74e3
  • 4.74e3
75.84
  • 75.84
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
6.69e3
  • 6.69e3
65.92
  • 65.92
AEIR
  • AEIR
UBERON:0000002uterine cervix
  • UBERON:0000113post-juvenile adult stage
6.94e3
  • 6.94e3
64.65
  • 64.65
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
7.39e3
  • 7.39e3
62.36
  • 62.36
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.06e4
  • 1.06e4
45.90
  • 45.90
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
1.08e4
  • 1.08e4
44.99
  • 44.99
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0018241prime adult stage
1.17e4
  • 1.17e4
40.52
  • 40.52
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
1.17e4
  • 1.17e4
40.24
  • 40.24
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.19e4
  • 1.19e4
39.62
  • 39.62
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000068embryo stage
1.23e4
  • 1.23e4
  • 1.25e4
37.26
  • 37.26
  • 36.58
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
1.23e4
  • 1.23e4
37.13
  • 37.13
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSCPOG00000003883.

Cross-references

EnsemblENSCPOG00000003883 (SLC39A8)
HGNCHGNC:20862 (SLC39A8)
EMBLAAKN02038761, AAKN02038762
Uniprot/SPTREMBLH0V1W7, H0V1W7_CAVPO

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