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C. porcellus Gene: SLC1A5 - ENSCPOG00000004326 - Cavia porcellus (guinea pig)

General information

Ensembl IDENSCPOG00000004326
NameSLC1A5
Descriptionsolute carrier family 1 (neutral amino acid transporter), member 5 [Source:HGNC Symbol;Acc:HGNC:10943]
OrganismCavia porcellus (guinea pig)
Synonym(s)aaat, asct2, m7v1, rdrc
Orthologs(s)17 orthologs
Paralog(s)6 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
3.86e3
  • 3.86e3
80.33
  • 80.33
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0018241prime adult stage
4.18e3
  • 4.18e3
78.72
  • 78.72
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
4.84e3
  • 4.84e3
75.37
  • 75.37
AEIR
  • AEIR
UBERON:0000002uterine cervix
  • UBERON:0000113post-juvenile adult stage
5.66e3
  • 5.66e3
71.19
  • 71.19
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
8.35e3
  • 8.35e3
57.46
  • 57.46
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0018241prime adult stage
8.69e3
  • 8.69e3
55.71
  • 55.71
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
8.97e3
  • 8.97e3
54.32
  • 54.32
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0000068embryo stage
  • UBERON:0000113post-juvenile adult stage
9.52e3
  • 9.52e3
  • 9.58e3
51.49
  • 51.49
  • 51.21
AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.01e4
  • 1.01e4
48.32
  • 48.32
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.06e4
  • 1.06e4
46.02
  • 46.02
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
1.10e4
  • 1.10e4
43.88
  • 43.88
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
1.27e4
  • 1.27e4
35.34
  • 35.34
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.29e4
  • 1.29e4
34.21
  • 34.21
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
1.36e4
  • 1.36e4
30.61
  • 30.61
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSCPOG00000004326.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Opisthokonta6 genesCompare expression

Paralogy information comes from OMA : ENSCPOG00000004326.

Cross-references

EnsemblENSCPOG00000004326 (SLC1A5)
HGNCHGNC:10943 (SLC1A5)
EMBLAAKN02048265, AAKN02048266
Uniprot/SPTREMBLH0V2W8, H0V2W8_CAVPO

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