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C. porcellus Gene: SEPHS1 - ENSCPOG00000005549 - Cavia porcellus (guinea pig)

General information

Ensembl IDENSCPOG00000005549
NameSEPHS1
Descriptionselenophosphate synthetase 1 [Source:HGNC Symbol;Acc:HGNC:19685]
OrganismCavia porcellus (guinea pig)
Synonym(s)sps, sps1
Orthologs(s)24 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
3.51e3
  • 3.51e3
82.15
  • 82.15
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
3.67e3
  • 3.67e3
81.31
  • 81.31
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
4.06e3
  • 4.06e3
79.34
  • 79.34
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
4.16e3
  • 4.16e3
78.80
  • 78.80
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0018241prime adult stage
4.21e3
  • 4.21e3
78.54
  • 78.54
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
4.29e3
  • 4.29e3
78.14
  • 78.14
AEIR
  • AEIR
UBERON:0000002uterine cervix
  • UBERON:0000113post-juvenile adult stage
4.50e3
  • 4.50e3
77.07
  • 77.07
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
4.82e3
  • 4.82e3
75.46
  • 75.46
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0000068embryo stage
  • UBERON:0000113post-juvenile adult stage
4.83e3
  • 4.83e3
  • 5.57e3
75.42
  • 75.42
  • 71.63
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
4.93e3
  • 4.93e3
74.90
  • 74.90
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
5.36e3
  • 5.36e3
72.69
  • 72.69
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0018241prime adult stage
5.42e3
  • 5.42e3
72.42
  • 72.42
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
6.65e3
  • 6.65e3
66.13
  • 66.13
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
7.64e3
  • 7.64e3
61.07
  • 61.07
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSCPOG00000005549.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression
Bilateria2 genesCompare expression

Paralogy information comes from OMA : ENSCPOG00000005549.

Cross-references

EnsemblENSCPOG00000005549 (SEPHS1)
HGNCHGNC:19685 (SEPHS1)
EMBLAAKN02037615, AAKN02037616
Uniprot/SPTREMBLH0V5Q3, H0V5Q3_CAVPO

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