We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

C. porcellus Gene: GTF3C6 - ENSCPOG00000006228 - Cavia porcellus (guinea pig)

General information

Ensembl IDENSCPOG00000006228
NameGTF3C6
Descriptiongeneral transcription factor IIIC subunit 6 [Source:HGNC Symbol;Acc:HGNC:20872]
OrganismCavia porcellus (guinea pig)
Synonym(s)ba397g5.3, c6orf51, tfiiic35
Orthologs(s)14 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002369adrenal gland
  • UBERON:0018241prime adult stage
625
  • 625
96.82
  • 96.82
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
993
  • 993
94.95
  • 94.95
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.17e3
  • 1.17e3
94.02
  • 94.02
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
1.36e3
  • 1.36e3
93.10
  • 93.10
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
1.44e3
  • 1.44e3
92.65
  • 92.65
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0000068embryo stage
  • UBERON:0000113post-juvenile adult stage
1.47e3
  • 1.47e3
  • 1.78e3
92.51
  • 92.51
  • 90.93
AEIR
  • AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0018241prime adult stage
1.61e3
  • 1.61e3
91.81
  • 91.81
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.63e3
  • 1.63e3
91.72
  • 91.72
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
1.77e3
  • 1.77e3
91.01
  • 91.01
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
2.25e3
  • 2.25e3
88.54
  • 88.54
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
2.35e3
  • 2.35e3
88.05
  • 88.05
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
2.73e3
  • 2.73e3
86.12
  • 86.12
AEIR
  • AEIR
UBERON:0000002uterine cervix
  • UBERON:0000113post-juvenile adult stage
2.81e3
  • 2.81e3
85.68
  • 85.68
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
5.22e3
  • 5.22e3
73.40
  • 73.40
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Rodentia2 species2 genesCompare expression
Euarchontoglires6 species7 genesCompare expression
Boreoeutheria12 species13 genesCompare expression
Mammalia13 species14 genesCompare expression

Orthology information comes from OMA : ENSCPOG00000006228.

Cross-references

EnsemblENSCPOG00000006228 (GTF3C6)
HGNCHGNC:20872 (GTF3C6)
EMBLAAKN02043635
Uniprot/SPTREMBLH0V7B4, H0V7B4_CAVPO

Do not show this banner again