C. porcellus Gene: BCAS1 - ENSCPOG00000009194 - Cavia porcellus (guinea pig)

General information

Ensembl IDENSCPOG00000009194
NameBCAS1
Descriptionbreast carcinoma amplified sequence 1 [Source:HGNC Symbol;Acc:HGNC:974]
OrganismCavia porcellus (guinea pig)
Synonym(s)aibc1, nabc1
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
657
  • 657
96.66
  • 96.66
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.96e3
  • 1.96e3
90.02
  • 90.02
AEIR
  • AEIR
UBERON:0000002uterine cervix
  • UBERON:0000113post-juvenile adult stage
2.05e3
  • 2.05e3
89.58
  • 89.58
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
4.36e3
  • 4.36e3
77.81
  • 77.81
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
5.27e3
  • 5.27e3
73.14
  • 73.14
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
1.11e4
  • 1.11e4
43.51
  • 43.51
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.17e4
  • 1.17e4
40.43
  • 40.43
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
1.26e4
  • 1.26e4
36.05
  • 36.05
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.37e4
  • 1.37e4
30.42
  • 30.42
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
1.51e4
  • 1.51e4
23.05
  • 23.05
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0018241prime adult stage
1.57e4
  • 1.57e4
20.20
  • 20.20
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression

Orthology information comes from OMA : ENSCPOG00000009194.

Cross-references

EnsemblENSCPOG00000009194 (BCAS1)
HGNCHGNC:974 (BCAS1)
EMBLAAKN02050398
Uniprot/SPTREMBLH0VE27, H0VE27_CAVPO

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