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C. porcellus Gene: SLC10A6 - ENSCPOG00000010363 - Cavia porcellus (guinea pig)

General information

Ensembl IDENSCPOG00000010363
NameSLC10A6
Descriptionsolute carrier family 10 (sodium/bile acid cotransporter), member 6 [Source:HGNC Symbol;Acc:HGNC:30603]
OrganismCavia porcellus (guinea pig)
Synonym(s)soat
Orthologs(s)15 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
5.73e3
  • 5.73e3
70.83
  • 70.83
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
8.32e3
  • 8.32e3
57.63
  • 57.63
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
8.67e3
  • 8.67e3
55.84
  • 55.84
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
9.55e3
  • 9.55e3
51.36
  • 51.36
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
9.70e3
  • 9.70e3
50.57
  • 50.57
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000068embryo stage
9.82e3
  • 9.82e3
  • 1.01e4
49.98
  • 49.98
  • 48.66
AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
1.07e4
  • 1.07e4
45.38
  • 45.38
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
1.07e4
  • 1.07e4
45.29
  • 45.29
AEIR
  • AEIR
UBERON:0000002uterine cervix
  • UBERON:0000113post-juvenile adult stage
1.13e4
  • 1.13e4
42.42
  • 42.42
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0018241prime adult stage
1.14e4
  • 1.14e4
41.81
  • 41.81
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.17e4
  • 1.17e4
40.31
  • 40.31
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0018241prime adult stage
1.22e4
  • 1.22e4
37.78
  • 37.78
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
36.66
  • 36.66
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression

Orthology information comes from OMA : ENSCPOG00000010363.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression
Eukaryota2 genesCompare expression

Paralogy information comes from OMA : ENSCPOG00000010363.

Cross-references

EnsemblENSCPOG00000010363 (SLC10A6)
HGNCHGNC:30603 (SLC10A6)
EMBLAAKN02033410
Uniprot/SPTREMBLH0VGQ8, H0VGQ8_CAVPO

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