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C. porcellus Gene: CHRNA4 - ENSCPOG00000010559 - Cavia porcellus (guinea pig)

General information

Ensembl IDENSCPOG00000010559
NameCHRNA4
Descriptioncholinergic receptor, nicotinic alpha 4 [Source:HGNC Symbol;Acc:HGNC:1958]
OrganismCavia porcellus (guinea pig)
Synonym(s)bfnc, ebn, ebn1
Orthologs(s)12 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
5.20e3
  • 5.20e3
73.53
  • 73.53
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
7.41e3
  • 7.41e3
62.25
  • 62.25
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0018241prime adult stage
8.89e3
  • 8.89e3
54.74
  • 54.74
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
9.36e3
  • 9.36e3
52.32
  • 52.32
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
9.63e3
  • 9.63e3
50.95
  • 50.95
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
36.75
  • 36.75
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
1.29e4
  • 1.29e4
34.25
  • 34.25
AEIR
  • AEIR
UBERON:0000002uterine cervix
  • UBERON:0000113post-juvenile adult stage
1.35e4
  • 1.35e4
31.11
  • 31.11
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0018241prime adult stage
1.53e4
  • 1.53e4
22.13
  • 22.13
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Orthology information comes from OMA : ENSCPOG00000010559.

Cross-references

EnsemblENSCPOG00000010559 (CHRNA4)
HGNCHGNC:1958 (CHRNA4)
EMBLAAKN02052572
Uniprot/SPTREMBLH0VH58, H0VH58_CAVPO

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