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C. porcellus Gene: ANKRD42 - ENSCPOG00000011236 - Cavia porcellus (guinea pig)

General information

Ensembl IDENSCPOG00000011236
NameANKRD42
Descriptionankyrin repeat domain 42 [Source:HGNC Symbol;Acc:HGNC:26752]
OrganismCavia porcellus (guinea pig)
Synonym(s)flj37874, ppp1r79, sarp
Orthologs(s)9 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0018241prime adult stage
1.20e3
  • 1.20e3
93.87
  • 93.87
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0018241prime adult stage
6.91e3
  • 6.91e3
64.83
  • 64.83
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000068embryo stage
8.34e3
  • 8.34e3
  • 9.67e3
57.50
  • 57.50
  • 50.77
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
8.39e3
  • 8.39e3
57.27
  • 57.27
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
8.76e3
  • 8.76e3
55.40
  • 55.40
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
9.29e3
  • 9.29e3
52.67
  • 52.67
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
9.54e3
  • 9.54e3
51.42
  • 51.42
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
9.63e3
  • 9.63e3
50.97
  • 50.97
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
9.70e3
  • 9.70e3
50.58
  • 50.58
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.01e4
  • 1.01e4
48.73
  • 48.73
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.01e4
  • 1.01e4
48.38
  • 48.38
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
1.02e4
  • 1.02e4
47.91
  • 47.91
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0018241prime adult stage
1.09e4
  • 1.09e4
44.42
  • 44.42
AEIR
  • AEIR
UBERON:0000002uterine cervix
  • UBERON:0000113post-juvenile adult stage
1.10e4
  • 1.10e4
43.74
  • 43.74
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
1.14e4
  • 1.14e4
41.87
  • 41.87
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Rodentia2 species2 genesCompare expression
Euarchontoglires4 species4 genesCompare expression
Theria5 species5 genesCompare expression
Mammalia6 species6 genesCompare expression
Amniota8 species8 genesCompare expression
Tetrapoda9 species9 genesCompare expression

Orthology information comes from OMA : ENSCPOG00000011236.

Cross-references

EnsemblENSCPOG00000011236 (ANKRD42)
HGNCHGNC:26752 (ANKRD42)
EMBLAAKN02037900, AAKN02037901
Uniprot/SPTREMBLH0VIQ3, H0VIQ3_CAVPO

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