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C. porcellus Gene: HMX2 - ENSCPOG00000011952 - Cavia porcellus (guinea pig)

General information

Ensembl IDENSCPOG00000011952
NameHMX2
DescriptionH6 family homeobox 2 [Source:HGNC Symbol;Acc:HGNC:5018]
OrganismCavia porcellus (guinea pig)
Synonym(s)nkx5-2
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
6.61e3
  • 6.61e3
66.32
  • 66.32
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
1.38e4
  • 1.38e4
29.59
  • 29.59
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression

Orthology information comes from OMA : ENSCPOG00000011952.

Cross-references

EnsemblENSCPOG00000011952 (HMX2)
HGNCHGNC:5018 (HMX2)
EMBLAAKN02002977
Uniprot/SPTREMBLH0VKD0, H0VKD0_CAVPO

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