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C. porcellus Gene: TLR1 - ENSCPOG00000012205 - Cavia porcellus (guinea pig)

General information

Ensembl IDENSCPOG00000012205
NameTLR1
Descriptiontoll-like receptor 1 [Source:HGNC Symbol;Acc:HGNC:11847]
OrganismCavia porcellus (guinea pig)
Synonym(s)cd281, kiaa0012, rsc786
Orthologs(s)18 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000002uterine cervix
  • UBERON:0000113post-juvenile adult stage
9.96e3
  • 9.96e3
49.26
  • 49.26
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.12e4
  • 1.12e4
43.05
  • 43.05
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.12e4
  • 1.12e4
42.93
  • 42.93
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0018241prime adult stage
1.33e4
  • 1.33e4
32.32
  • 32.32
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0000113post-juvenile adult stage
1.40e4
  • 1.40e4
28.64
  • 28.64
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
1.42e4
  • 1.42e4
27.57
  • 27.57
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
1.45e4
  • 1.45e4
26.15
  • 26.15
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Mammalia12 species12 genesCompare expression
Amniota14 species15 genesCompare expression
Tetrapoda15 species17 genesCompare expression
Euteleostomi16 species18 genesCompare expression

Orthology information comes from OMA : ENSCPOG00000012205.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Mammalia1 geneCompare expression
Euteleostomi2 genesCompare expression

Paralogy information comes from OMA : ENSCPOG00000012205.

Cross-references

EnsemblENSCPOG00000012205 (TLR1)
HGNCHGNC:11847 (TLR1)
EMBLAAKN02028002
Uniprot/SPTREMBLH0VKX3, H0VKX3_CAVPO

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