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C. porcellus Gene: TRIM67 - ENSCPOG00000012219 - Cavia porcellus (guinea pig)

General information

Ensembl IDENSCPOG00000012219
NameTRIM67
Descriptiontripartite motif containing 67 [Source:HGNC Symbol;Acc:HGNC:31859]
OrganismCavia porcellus (guinea pig)
Synonym(s)tnl
Orthologs(s)17 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
4.90e3
  • 4.90e3
75.04
  • 75.04
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
1.27e4
  • 1.27e4
35.14
  • 35.14
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
1.35e4
  • 1.35e4
31.40
  • 31.40
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.37e4
  • 1.37e4
30.09
  • 30.09
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Bilateria17 species17 genesCompare expression

Orthology information comes from OMA : ENSCPOG00000012219.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSCPOG00000012219.

Cross-references

EnsemblENSCPOG00000012219 (TRIM67)
HGNCHGNC:31859 (TRIM67)
EMBLAAKN02021628
Uniprot/SPTREMBLH0VKY3, H0VKY3_CAVPO

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