C. porcellus Gene: DCHS1 - ENSCPOG00000012536 - Cavia porcellus (guinea pig)

General information

Ensembl IDENSCPOG00000012536
NameDCHS1
Descriptiondachsous cadherin-related 1 [Source:HGNC Symbol;Acc:HGNC:13681]
OrganismCavia porcellus (guinea pig)
Synonym(s)cdh25, cdhr6, fib1, flj11790, kiaa1773, pcdh16
Orthologs(s)19 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000002uterine cervix
  • UBERON:0000113post-juvenile adult stage
7.37e3
  • 7.37e3
62.45
  • 62.45
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
8.19e3
  • 8.19e3
58.27
  • 58.27
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
9.67e3
  • 9.67e3
50.73
  • 50.73
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
9.93e3
  • 9.93e3
49.41
  • 49.41
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.00e4
  • 1.00e4
48.91
  • 48.91
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000068embryo stage
1.02e4
  • 1.02e4
  • 1.06e4
47.98
  • 47.98
  • 45.87
AEIR
  • AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0018241prime adult stage
1.03e4
  • 1.03e4
47.66
  • 47.66
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
1.09e4
  • 1.09e4
44.59
  • 44.59
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
1.10e4
  • 1.10e4
43.98
  • 43.98
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
1.10e4
  • 1.10e4
43.91
  • 43.91
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.11e4
  • 1.11e4
43.71
  • 43.71
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.17e4
  • 1.17e4
40.40
  • 40.40
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0018241prime adult stage
1.22e4
  • 1.22e4
37.91
  • 37.91
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.22e4
  • 1.22e4
37.67
  • 37.67
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species19 genesCompare expression

Orthology information comes from OMA : ENSCPOG00000012536.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Vertebrata1 geneCompare expression

Paralogy information comes from OMA : ENSCPOG00000012536.

Cross-references

EnsemblENSCPOG00000012536 (DCHS1)
HGNCHGNC:13681 (DCHS1)
EMBLAAKN02046503
Uniprot/SPTREMBLH0VLN5, H0VLN5_CAVPO

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