C. porcellus Gene: TXNDC16 - ENSCPOG00000012597 - Cavia porcellus (guinea pig)

General information

Ensembl IDENSCPOG00000012597
NameTXNDC16
Descriptionthioredoxin domain containing 16 [Source:HGNC Symbol;Acc:HGNC:19965]
OrganismCavia porcellus (guinea pig)
Synonym(s)kiaa1344
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002084heart left ventricle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000068embryo stage
7.41e3
  • 7.41e3
  • 8.40e3
62.23
  • 62.23
  • 57.20
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
8.26e3
  • 8.26e3
57.95
  • 57.95
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
8.77e3
  • 8.77e3
55.34
  • 55.34
AEIR
  • AEIR
UBERON:0000002uterine cervix
  • UBERON:0000113post-juvenile adult stage
8.83e3
  • 8.83e3
55.01
  • 55.01
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
8.89e3
  • 8.89e3
54.72
  • 54.72
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0018241prime adult stage
9.31e3
  • 9.31e3
52.57
  • 52.57
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
9.70e3
  • 9.70e3
50.61
  • 50.61
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
9.90e3
  • 9.90e3
49.59
  • 49.59
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
9.96e3
  • 9.96e3
49.27
  • 49.27
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.03e4
  • 1.03e4
47.78
  • 47.78
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
1.04e4
  • 1.04e4
47.13
  • 47.13
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.05e4
  • 1.05e4
46.54
  • 46.54
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0018241prime adult stage
1.09e4
  • 1.09e4
44.59
  • 44.59
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
1.11e4
  • 1.11e4
43.29
  • 43.29
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSCPOG00000012597.

Cross-references

EnsemblENSCPOG00000012597 (TXNDC16)
HGNCHGNC:19965 (TXNDC16)
EMBLAAKN02027631, AAKN02027632, AAKN02027633
Uniprot/SPTREMBLH0VLT0, H0VLT0_CAVPO

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