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C. porcellus Gene: PSCA - ENSCPOG00000013169 - Cavia porcellus (guinea pig)

General information

Ensembl IDENSCPOG00000013169
NamePSCA
Descriptionprostate stem cell antigen [Source:HGNC Symbol;Acc:HGNC:9500]
OrganismCavia porcellus (guinea pig)
Orthologs(s)12 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000002uterine cervix
  • UBERON:0000113post-juvenile adult stage
3.41e3
  • 3.41e3
82.62
  • 82.62
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.33e4
  • 1.33e4
32.35
  • 32.35
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.61e4
  • 1.61e4
18.08
  • 18.08
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
1.62e4
  • 1.62e4
17.46
  • 17.46
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0018241prime adult stage
1.74e4
  • 1.74e4
11.30
  • 11.30
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
1.74e4
  • 1.74e4
11.13
  • 11.13
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
1.78e4
  • 1.78e4
9.22
  • 9.22
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.81e4
  • 1.81e4
7.99
  • 7.99
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria9 species9 genesCompare expression
Amniota11 species11 genesCompare expression
Tetrapoda12 species12 genesCompare expression

Orthology information comes from OMA : ENSCPOG00000013169.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Tetrapoda2 genesCompare expression

Paralogy information comes from OMA : ENSCPOG00000013169.

Cross-references

EnsemblENSCPOG00000013169 (PSCA)
HGNCHGNC:9500 (PSCA)
EMBLAAKN02023195
Uniprot/SPTREMBLH0VN46, H0VN46_CAVPO

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