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C. porcellus Gene: LRSAM1 - ENSCPOG00000013773 - Cavia porcellus (guinea pig)

General information

Ensembl IDENSCPOG00000013773
NameLRSAM1
Descriptionleucine rich repeat and sterile alpha motif containing 1 [Source:HGNC Symbol;Acc:HGNC:25135]
OrganismCavia porcellus (guinea pig)
Synonym(s)cmt2p, flj31641
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002046thyroid gland
  • UBERON:0018241prime adult stage
5.05e3
  • 5.05e3
74.30
  • 74.30
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
5.18e3
  • 5.18e3
73.60
  • 73.60
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
5.35e3
  • 5.35e3
72.74
  • 72.74
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
5.78e3
  • 5.78e3
70.58
  • 70.58
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
6.33e3
  • 6.33e3
67.74
  • 67.74
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0018241prime adult stage
6.49e3
  • 6.49e3
66.95
  • 66.95
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
6.68e3
  • 6.68e3
66.00
  • 66.00
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
6.80e3
  • 6.80e3
65.36
  • 65.36
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
6.80e3
  • 6.80e3
65.35
  • 65.35
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
6.99e3
  • 6.99e3
64.39
  • 64.39
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
7.55e3
  • 7.55e3
61.52
  • 61.52
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000068embryo stage
7.69e3
  • 7.69e3
  • 8.49e3
60.84
  • 60.84
  • 56.77
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
8.09e3
  • 8.09e3
58.79
  • 58.79
AEIR
  • AEIR
UBERON:0000002uterine cervix
  • UBERON:0000113post-juvenile adult stage
8.21e3
  • 8.21e3
58.18
  • 58.18
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Rodentia2 species2 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSCPOG00000013773.

Cross-references

EnsemblENSCPOG00000013773 (LRSAM1)
HGNCHGNC:25135 (LRSAM1)
EMBLAAKN02030238, AAKN02030239
Uniprot/SPTREMBLH0VPI4, H0VPI4_CAVPO

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