C. porcellus Gene: AP1S3 - ENSCPOG00000014921 - Cavia porcellus (guinea pig)

General information

Ensembl IDENSCPOG00000014921
NameAP1S3
Descriptionadaptor related protein complex 1 sigma 3 subunit [Source:HGNC Symbol;Acc:HGNC:18971]
OrganismCavia porcellus (guinea pig)
Orthologs(s)18 orthologs
Paralog(s)6 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002369adrenal gland
  • UBERON:0018241prime adult stage
2.39e3
  • 2.39e3
87.84
  • 87.84
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
2.41e3
  • 2.41e3
87.73
  • 87.73
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
4.63e3
  • 4.63e3
76.41
  • 76.41
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
5.24e3
  • 5.24e3
73.29
  • 73.29
AEIR
  • AEIR
UBERON:0000002uterine cervix
  • UBERON:0000113post-juvenile adult stage
6.47e3
  • 6.47e3
67.04
  • 67.04
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0018241prime adult stage
8.33e3
  • 8.33e3
57.57
  • 57.57
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
8.54e3
  • 8.54e3
56.51
  • 56.51
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0000068embryo stage
  • UBERON:0000113post-juvenile adult stage
8.54e3
  • 8.54e3
  • 9.33e3
56.49
  • 56.49
  • 52.50
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
8.67e3
  • 8.67e3
55.86
  • 55.86
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
8.84e3
  • 8.84e3
54.98
  • 54.98
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
1.04e4
  • 1.04e4
46.78
  • 46.78
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
1.44e4
  • 1.44e4
26.64
  • 26.64
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.54e4
  • 1.54e4
21.72
  • 21.72
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
1.61e4
  • 1.61e4
18.19
  • 18.19
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSCPOG00000014921.

Paralogs (same species)

Paralogy information comes from OMA : ENSCPOG00000014921.

Cross-references

EnsemblENSCPOG00000014921 (AP1S3)
HGNCHGNC:18971 (AP1S3)
EMBLAAKN02049471
Uniprot/SPTREMBLH0VS56, H0VS56_CAVPO

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