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C. porcellus Gene: PDE1B - ENSCPOG00000015102 - Cavia porcellus (guinea pig)

General information

Ensembl IDENSCPOG00000015102
NamePDE1B
Descriptionphosphodiesterase 1B [Source:HGNC Symbol;Acc:HGNC:8775]
OrganismCavia porcellus (guinea pig)
Synonym(s)pdes1b
Orthologs(s)16 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0018241prime adult stage
1.16e3
  • 1.16e3
94.09
  • 94.09
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
1.40e3
  • 1.40e3
92.87
  • 92.87
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
2.04e3
  • 2.04e3
89.61
  • 89.61
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
4.60e3
  • 4.60e3
76.58
  • 76.58
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
7.27e3
  • 7.27e3
62.99
  • 62.99
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
7.43e3
  • 7.43e3
62.15
  • 62.15
AEIR
  • AEIR
UBERON:0000002uterine cervix
  • UBERON:0000113post-juvenile adult stage
8.59e3
  • 8.59e3
56.24
  • 56.24
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
8.63e3
  • 8.63e3
56.05
  • 56.05
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0018241prime adult stage
9.93e3
  • 9.93e3
49.42
  • 49.42
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
1.01e4
  • 1.01e4
48.69
  • 48.69
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0018241prime adult stage
1.04e4
  • 1.04e4
47.21
  • 47.21
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000068embryo stage
1.10e4
  • 1.10e4
  • 1.18e4
43.80
  • 43.80
  • 40.08
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
1.20e4
  • 1.20e4
39.10
  • 39.10
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
1.25e4
  • 1.25e4
36.36
  • 36.36
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.35e4
  • 1.35e4
31.00
  • 31.00
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Rodentia2 species2 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression

Orthology information comes from OMA : ENSCPOG00000015102.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSCPOG00000015102.

Cross-references

EnsemblENSCPOG00000015102 (PDE1B)
HGNCHGNC:8775 (PDE1B)
EMBLAAKN02014956, AAKN02014957
Uniprot/SPTREMBLH0VSK1, H0VSK1_CAVPO

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