We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

C. porcellus Gene: CPSF6 - ENSCPOG00000015201 - Cavia porcellus (guinea pig)

General information

Ensembl IDENSCPOG00000015201
NameCPSF6
Descriptioncleavage and polyadenylation specific factor 6 [Source:HGNC Symbol;Acc:HGNC:13871]
OrganismCavia porcellus (guinea pig)
Synonym(s)cfim, cfim68, hpbrii-4, hpbrii-7
Orthologs(s)25 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000002uterine cervix
  • UBERON:0000113post-juvenile adult stage
2.83e3
  • 2.83e3
85.60
  • 85.60
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
2.95e3
  • 2.95e3
84.96
  • 84.96
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
3.17e3
  • 3.17e3
83.88
  • 83.88
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
3.21e3
  • 3.21e3
83.65
  • 83.65
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
3.38e3
  • 3.38e3
82.80
  • 82.80
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
3.51e3
  • 3.51e3
82.15
  • 82.15
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0018241prime adult stage
3.53e3
  • 3.53e3
82.02
  • 82.02
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0018241prime adult stage
3.77e3
  • 3.77e3
80.79
  • 80.79
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
4.24e3
  • 4.24e3
78.40
  • 78.40
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
4.33e3
  • 4.33e3
77.97
  • 77.97
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0000068embryo stage
  • UBERON:0000113post-juvenile adult stage
4.49e3
  • 4.49e3
  • 4.70e3
77.11
  • 77.11
  • 76.07
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
4.60e3
  • 4.60e3
76.57
  • 76.57
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
4.73e3
  • 4.73e3
75.92
  • 75.92
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
4.89e3
  • 4.89e3
75.11
  • 75.11
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
4.95e3
  • 4.95e3
74.78
  • 74.78
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression
Bilateria25 species25 genesCompare expression

Orthology information comes from OMA : ENSCPOG00000015201.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Bilateria1 geneCompare expression

Paralogy information comes from OMA : ENSCPOG00000015201.

Cross-references

Do not show this banner again