C. porcellus Gene: VAX2 - ENSCPOG00000019567 - Cavia porcellus (guinea pig)

General information

Ensembl IDENSCPOG00000019567
NameVAX2
Descriptionventral anterior homeobox 2 [Source:HGNC Symbol;Acc:HGNC:12661]
OrganismCavia porcellus (guinea pig)
Synonym(s)dres93
Orthologs(s)14 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0018241prime adult stage
7.00e3
  • 7.00e3
64.37
  • 64.37
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
1.34e4
  • 1.34e4
32.00
  • 32.00
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Amniota13 species13 genesCompare expression
Euteleostomi14 species14 genesCompare expression

Orthology information comes from OMA : ENSCPOG00000019567.

Cross-references

EnsemblENSCPOG00000019567 (VAX2)
HGNCHGNC:12661 (VAX2)
EMBLAAKN02036888
Uniprot/SPTREMBLH0W5P7, H0W5P7_CAVPO

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