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C. porcellus Gene: JOSD2 - ENSCPOG00000020729 - Cavia porcellus (guinea pig)

General information

Ensembl IDENSCPOG00000020729
NameJOSD2
DescriptionJosephin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:28853]
OrganismCavia porcellus (guinea pig)
Synonym(s)sbbi54
Orthologs(s)20 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002046thyroid gland
  • UBERON:0018241prime adult stage
2.02e3
  • 2.02e3
89.72
  • 89.72
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
2.32e3
  • 2.32e3
88.18
  • 88.18
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
2.48e3
  • 2.48e3
87.39
  • 87.39
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0018241prime adult stage
2.56e3
  • 2.56e3
86.95
  • 86.95
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
2.87e3
  • 2.87e3
85.38
  • 85.38
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
3.12e3
  • 3.12e3
84.14
  • 84.14
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
3.36e3
  • 3.36e3
82.88
  • 82.88
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
3.40e3
  • 3.40e3
82.70
  • 82.70
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0000068embryo stage
  • UBERON:0000113post-juvenile adult stage
3.46e3
  • 3.46e3
  • 5.04e3
82.36
  • 82.36
  • 74.34
AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
3.48e3
  • 3.48e3
82.26
  • 82.26
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
3.83e3
  • 3.83e3
80.51
  • 80.51
AEIR
  • AEIR
UBERON:0000002uterine cervix
  • UBERON:0000113post-juvenile adult stage
4.67e3
  • 4.67e3
76.22
  • 76.22
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
4.93e3
  • 4.93e3
74.88
  • 74.88
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
5.03e3
  • 5.03e3
74.37
  • 74.37
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Rodentia2 species2 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria10 species10 genesCompare expression
Amniota11 species11 genesCompare expression
Euteleostomi12 species12 genesCompare expression
Bilateria19 species20 genesCompare expression

Orthology information comes from OMA : ENSCPOG00000020729.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSCPOG00000020729.

Cross-references

EnsemblENSCPOG00000020729 (JOSD2)
HGNCHGNC:28853 (JOSD2)
EMBLAAKN02046399
Uniprot/SPTREMBLH0VZD1, H0VZD1_CAVPO

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