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C. porcellus Gene: NRN1 - ENSCPOG00000021547 - Cavia porcellus (guinea pig)

General information

Ensembl IDENSCPOG00000021547
NameNRN1
Descriptionneuritin 1 [Source:HGNC Symbol;Acc:HGNC:17972]
OrganismCavia porcellus (guinea pig)
Synonym(s)nrn
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
397
  • 397
97.99
  • 97.99
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
554
  • 554
97.18
  • 97.18
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.72e3
  • 1.72e3
91.22
  • 91.22
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0000068embryo stage
  • UBERON:0000113post-juvenile adult stage
3.30e3
  • 3.30e3
  • 4.14e3
83.21
  • 83.21
  • 78.92
AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
3.70e3
  • 3.70e3
81.17
  • 81.17
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
4.88e3
  • 4.88e3
75.14
  • 75.14
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
6.29e3
  • 6.29e3
67.97
  • 67.97
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0018241prime adult stage
8.56e3
  • 8.56e3
56.39
  • 56.39
AEIR
  • AEIR
UBERON:0000002uterine cervix
  • UBERON:0000113post-juvenile adult stage
8.68e3
  • 8.68e3
55.79
  • 55.79
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.03e4
  • 1.03e4
47.61
  • 47.61
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.10e4
  • 1.10e4
43.86
  • 43.86
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0018241prime adult stage
1.12e4
  • 1.12e4
43.16
  • 43.16
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
1.14e4
  • 1.14e4
41.69
  • 41.69
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.36e4
  • 1.36e4
30.78
  • 30.78
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Euteleostomi15 species16 genesCompare expression

Orthology information comes from OMA : ENSCPOG00000021547.

Cross-references

EnsemblENSCPOG00000021547 (NRN1)
HGNCHGNC:17972 (NRN1)
EMBLAAKN02037000
Uniprot/SPTREMBLH0VXG4, H0VXG4_CAVPO

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