D. rerio Gene: celf2 - ENSDARG00000002131 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000002131
Namecelf2
Descriptioncugbp, Elav-like family member 2 [Source:ZFIN;Acc:ZDB-GENE-030826-35]
OrganismDanio rerio (zebrafish)
Synonym(s)cb906, cugbp2, etr-3, fj87b07, wu:fj87b07
Orthologs(s)23 orthologs
Paralog(s)439 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
705
  • 705
  • 2.61e3
  • 3.13e3
97.64
  • 97.64
  • 91.27
  • 89.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000106zygote stage
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000104life cycle
  • UBERON:0000109gastrula stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000019Gastrula:Shield
1.56e3
  • 1.56e3
  • 2.11e3
  • 2.46e3
  • 2.67e3
  • 2.96e3
  • 4.83e3
  • 5.16e3
  • 9.88e3
  • 1.01e4
  • 1.29e4
  • 1.49e4
  • 1.53e4
  • 1.56e4
94.77
  • 94.77
  • 92.93
  • 91.76
  • 91.05
  • 90.10
  • 83.84
  • 82.73
  • 66.92
  • 66.35
  • 56.79
  • 49.99
  • 48.65
  • 47.93
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.71e3
  • 1.71e3
94.27
  • 94.27
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
1.94e3
  • 1.94e3
  • 3.80e3
  • 1.45e4
93.49
  • 93.49
  • 87.28
  • 51.33
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
2.04e3
  • 2.04e3
  • 2.25e3
  • 2.27e3
  • 3.88e3
  • 4.76e3
  • 5.20e3
  • 5.46e3
  • 5.46e3
  • 9.82e3
  • 1.21e4
93.16
  • 93.16
  • 92.46
  • 92.41
  • 87.00
  • 84.08
  • 82.59
  • 81.73
  • 81.71
  • 67.11
  • 59.33
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
2.78e3
  • 2.78e3
  • 3.71e3
  • 4.46e3
90.69
  • 90.69
  • 87.59
  • 85.08
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
2.86e3
  • 2.86e3
  • 3.41e3
90.43
  • 90.43
  • 88.59
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
3.26e3
  • 3.26e3
89.10
  • 89.10
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.49e3
  • 4.49e3
84.96
  • 84.96
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
4.84e3
  • 4.84e3
  • 7.02e3
83.79
  • 83.79
  • 76.50
AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
5.72e3
  • 5.72e3
80.86
  • 80.86
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.81e3
  • 5.81e3
80.56
  • 80.56
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
5.84e3
  • 5.84e3
80.44
  • 80.44
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.32e3
  • 6.32e3
78.85
  • 78.85
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.35e3
  • 6.35e3
78.74
  • 78.74
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
6.39e3
  • 6.39e3
  • 9.70e3
78.59
  • 78.59
  • 67.51
AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
6.79e3
  • 6.79e3
  • 7.47e3
77.27
  • 77.27
  • 74.99
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
6.86e3
  • 6.86e3
77.05
  • 77.05
AEIR
  • AEIR
UBERON:0002037cerebellum
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
6.97e3
  • 6.97e3
  • 7.47e3
76.66
  • 76.66
  • 74.99
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
7.06e3
  • 7.06e3
76.36
  • 76.36
AEIR
  • AEIR
UBERON:0001890forebrain
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
7.97e3
  • 7.97e3
  • 8.04e3
  • 9.19e3
73.32
  • 73.32
  • 73.07
  • 69.22
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001894diencephalon
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
8.30e3
  • 8.30e3
  • 9.10e3
  • 9.51e3
72.21
  • 72.21
  • 69.55
  • 68.16
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0010312immature eye
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
8.30e3
  • 8.30e3
  • 8.65e3
  • 8.79e3
  • 9.25e3
72.21
  • 72.21
  • 71.04
  • 70.57
  • 69.03
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001714cranial ganglion
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
8.40e3
  • 8.40e3
  • 8.96e3
  • 8.96e3
71.86
  • 71.86
  • 69.99
  • 69.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001892rhombomere
  • ZFS:0000026Segmentation:14-19 somites
8.54e3
  • 8.54e3
71.42
  • 71.42
AEIR
  • AEIR
UBERON:0001893telencephalon
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
8.65e3
  • 8.65e3
  • 8.65e3
  • 9.13e3
  • 9.34e3
  • 9.44e3
  • 9.44e3
71.04
  • 71.04
  • 71.04
  • 69.43
  • 68.73
  • 68.40
  • 68.40
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002028hindbrain
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
8.96e3
  • 8.96e3
  • 8.96e3
  • 9.10e3
  • 9.25e3
  • 9.61e3
69.98
  • 69.98
  • 69.98
  • 69.55
  • 69.03
  • 67.83
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003082myotome
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
8.96e3
  • 8.96e3
  • 9.13e3
  • 9.13e3
69.98
  • 69.98
  • 69.43
  • 69.43
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.08e3
  • 9.08e3
69.58
  • 69.58
AEIR
  • AEIR
UBERON:0001017central nervous system
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
1.03e4
  • 1.03e4
  • 1.07e4
65.37
  • 65.37
  • 64.27
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.49
  • 63.49
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.12e4
  • 1.12e4
62.37
  • 62.37
AEIR
  • AEIR
UBERON:0007269pectoral appendage musculature
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
1.18e4
  • 1.18e4
  • 1.18e4
60.50
  • 60.50
  • 60.50
AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
1.20e4
  • 1.20e4
  • 1.25e4
  • 1.27e4
59.98
  • 59.98
  • 58.31
  • 57.47
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
1.20e4
  • 1.20e4
  • 1.34e4
  • 1.39e4
  • 1.60e4
59.89
  • 59.89
  • 55.07
  • 53.39
  • 46.35
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.88
  • 57.88
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
56.56
  • 56.56
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.34e4
  • 1.34e4
55.22
  • 55.22
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.40e4
  • 1.40e4
53.21
  • 53.21
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.42e4
  • 1.42e4
52.49
  • 52.49
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.54e4
  • 1.54e4
48.36
  • 48.36
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
1.55e4
  • 1.55e4
  • 1.61e4
47.98
  • 47.98
  • 46.05
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi19 species19 genesCompare expression
Bilateria23 species23 genesCompare expression

Orthology information comes from OMA : ENSDARG00000002131.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression
Opisthokonta6 genesCompare expression
Eukaryota439 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000002131.

Cross-references

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