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D. rerio Gene: cyp11a1 - ENSDARG00000002347 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000002347
Namecyp11a1
Descriptioncytochrome P450, family 11, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-010306-1]
OrganismDanio rerio (zebrafish)
Synonym(s)cb957, p450scc, scc, side-chain cleavage enzyme, wu:fj97d10
Orthologs(s)14 orthologs
Paralog(s)40 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
221
  • 221
99.26
  • 99.26
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
638
  • 638
97.87
  • 97.87
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
1.04e3
  • 1.04e3
  • 1.29e3
  • 2.93e3
  • 3.60e3
  • 5.52e3
96.51
  • 96.51
  • 95.68
  • 90.20
  • 87.93
  • 81.52
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
1.30e3
  • 1.30e3
  • 2.42e3
  • 2.56e3
  • 3.22e3
  • 3.28e3
  • 6.77e3
95.65
  • 95.65
  • 91.89
  • 91.42
  • 89.23
  • 89.03
  • 77.34
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
  • UBERON:0000109gastrula stage
  • UBERON:0000104life cycle
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
1.48e3
  • 1.48e3
  • 2.17e3
  • 2.53e3
  • 2.59e3
  • 3.03e3
  • 3.16e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.91e3
  • 7.47e3
  • 1.07e4
  • 1.38e4
  • 1.47e4
  • 1.49e4
  • 1.50e4
  • 1.58e4
  • 1.60e4
  • 1.65e4
  • 1.66e4
95.06
  • 95.06
  • 92.73
  • 91.55
  • 91.32
  • 89.86
  • 89.43
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 76.85
  • 74.99
  • 64.17
  • 53.84
  • 50.68
  • 49.99
  • 49.92
  • 47.16
  • 46.26
  • 44.63
  • 44.35
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.60e3
  • 1.60e3
94.66
  • 94.66
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.81e3
  • 1.81e3
93.94
  • 93.94
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.95e3
  • 1.95e3
  • 3.32e3
  • 5.48e3
  • 5.73e3
  • 9.62e3
  • 1.09e4
  • 1.55e4
  • 2.23e4
  • 2.45e4
93.48
  • 93.48
  • 88.88
  • 81.64
  • 80.82
  • 67.78
  • 63.49
  • 48.12
  • 25.44
  • 17.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.31e3
  • 2.31e3
92.26
  • 92.26
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.45e3
  • 2.45e3
91.79
  • 91.79
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
2.46e3
  • 2.46e3
91.78
  • 91.78
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
3.71e3
  • 3.71e3
87.58
  • 87.58
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.47e3
  • 4.47e3
85.03
  • 85.03
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
5.98e3
  • 5.98e3
  • 5.98e3
  • 6.22e3
  • 6.40e3
  • 6.97e3
  • 7.97e3
  • 9.13e3
79.99
  • 79.99
  • 79.99
  • 79.16
  • 78.56
  • 76.66
  • 73.32
  • 69.43
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
6.70e3
  • 6.70e3
77.57
  • 77.57
AEIR
  • AEIR
UBERON:0006856interrenal gland
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
7.47e3
  • 7.47e3
  • 7.47e3
  • 1.49e4
75.00
  • 75.00
  • 75.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003100female organism
  • ZFS:0000041Larval:Days 21-29
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0006857interrenal primordium
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000029Pharyngula:Prim-5
7.47e3
  • 7.47e3
  • 1.49e4
  • 1.49e4
  • 1.49e4
75.00
  • 75.00
  • 50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2000088YSL
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
8.96e3
  • 8.96e3
  • 8.96e3
  • 8.96e3
  • 9.96e3
  • 1.07e4
  • 1.23e4
  • 1.26e4
  • 1.28e4
  • 1.28e4
  • 1.28e4
69.99
  • 69.99
  • 69.99
  • 69.99
  • 66.65
  • 64.27
  • 58.80
  • 57.68
  • 57.13
  • 57.13
  • 57.13
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
9.48e3
  • 9.48e3
68.25
  • 68.25
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
9.79e3
  • 9.79e3
  • 1.50e4
67.21
  • 67.21
  • 49.92
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
  • 2.20e4
55.25
  • 55.25
  • 26.27
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.71e4
  • 1.71e4
42.79
  • 42.79
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
1.82e4
  • 1.82e4
39.08
  • 39.08
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
2.00e4
  • 2.00e4
33.07
  • 33.07
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.04e4
  • 2.04e4
31.68
  • 31.68
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.18e4
  • 2.18e4
26.92
  • 26.92
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.34e4
  • 2.34e4
21.81
  • 21.81
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
2.34e4
  • 2.34e4
21.52
  • 21.52
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Paralogs (same species)

Cross-references

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