D. rerio Gene: ercc6l - ENSDARG00000002479 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000002479
Nameercc6l
Descriptionexcision repair cross-complementation group 6-like [Source:ZFIN;Acc:ZDB-GENE-060531-56]
OrganismDanio rerio (zebrafish)
Synonym(s)a7e225, fc22h03, si:ch211-278b8.3, wu:fc22h03

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
2.09e3
  • 2.09e3
  • 2.78e3
  • 4.65e3
  • 4.94e3
  • 5.24e3
93.00298
  • 93.00298
  • 90.69250
  • 84.43874
  • 83.44778
  • 82.46620
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
2.74e3
  • 2.74e3
  • 2.82e3
  • 3.79e3
  • 4.19e3
  • 4.27e3
  • 4.64e3
90.82631
  • 90.82631
  • 90.57081
  • 87.30868
  • 85.98279
  • 85.69280
  • 84.47959
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • UBERON:0000106zygote stage
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
3.00e3
  • 3.00e3
  • 3.79e3
  • 3.89e3
  • 4.49e3
  • 4.98e3
  • 5.55e3
  • 6.15e3
  • 6.26e3
  • 6.54e3
  • 6.64e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.97e3
  • 7.03e3
  • 7.47e3
  • 7.47e3
  • 7.57e3
  • 7.91e3
  • 8.28e3
  • 8.96e3
  • 8.96e3
  • 9.29e3
  • 1.02e4
  • 1.07e4
  • 1.10e4
  • 1.33e4
  • 1.39e4
  • 1.47e4
89.95081
  • 89.95081
  • 87.30436
  • 86.98557
  • 84.96206
  • 83.32833
  • 81.41530
  • 79.41071
  • 79.03509
  • 78.11663
  • 77.76774
  • 77.26769
  • 77.26769
  • 77.26769
  • 77.26769
  • 77.26769
  • 77.26769
  • 77.26769
  • 77.26769
  • 77.26769
  • 77.26769
  • 77.26769
  • 77.26769
  • 77.26769
  • 76.65831
  • 76.46134
  • 74.99330
  • 74.99330
  • 74.64712
  • 73.51770
  • 72.26876
  • 69.98828
  • 69.98828
  • 68.90942
  • 65.81074
  • 64.10940
  • 63.06326
  • 55.38429
  • 53.43984
  • 50.90001
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
3.51e3
  • 3.51e3
  • 7.00e3
  • 1.45e4
88.26082
  • 88.26082
  • 76.55045
  • 51.53585
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
3.79e3
  • 3.79e3
87.31598
  • 87.31598
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
4.20e3
  • 4.20e3
85.95252
  • 85.95252
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
4.37e3
  • 4.37e3
85.36949
  • 85.36949
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
4.74e3
  • 4.74e3
  • 4.80e3
  • 5.82e3
  • 6.20e3
  • 7.29e3
  • 7.86e3
  • 7.86e3
  • 8.36e3
  • 8.58e3
  • 1.40e4
84.11747
  • 84.11747
  • 83.93705
  • 80.50996
  • 79.23531
  • 75.57600
  • 73.68436
  • 73.68332
  • 72.01326
  • 71.26531
  • 53.04203
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
5.26e3
  • 5.26e3
82.40023
  • 82.40023
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
5.43e3
  • 5.43e3
81.81358
  • 81.81358
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
5.55e3
  • 5.55e3
81.40304
  • 81.40304
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
6.89e3
  • 6.89e3
76.93885
  • 76.93885
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
7.18e3
  • 7.18e3
75.96990
  • 75.96990
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
7.83e3
  • 7.83e3
73.78696
  • 73.78696
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
7.84e3
  • 7.84e3
73.75987
  • 73.75987
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
8.35e3
  • 8.35e3
  • 1.91e4
72.05334
  • 72.05334
  • 36.07025
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
8.56e3
  • 8.56e3
71.32572
  • 71.32572
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
8.57e3
  • 8.57e3
71.31567
  • 71.31567
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.61508
  • 64.61508
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.53588
  • 63.53588
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.09e4
  • 1.09e4
63.42136
  • 63.42136
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
61.36356
  • 61.36356
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
1.17e4
  • 1.17e4
  • 1.36e4
  • 1.43e4
60.91170
  • 60.91170
  • 54.33480
  • 52.01755
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.78552
  • 60.78552
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.74406
  • 60.74406
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.20795
  • 59.20795
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.71841
  • 57.71841
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.27e4
  • 1.27e4
  • 1.54e4
57.62927
  • 57.62927
  • 48.36028
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
  • 2.14e4
57.22228
  • 57.22228
  • 28.22221
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
56.03255
  • 56.03255
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
47.01470
  • 47.01470
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.64e4
  • 1.64e4
45.01427
  • 45.01427
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.92e4
  • 1.92e4
35.68556
  • 35.68556
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBC150168, BX510925, CR391924
EnsemblENSDARG00000002479 (ercc6l)
Uniprot/SWISSPROTA2BGR3, ERC6L_DANRE
ZFINZDB-GENE-060531-56 (ercc6l)

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