D. rerio Gene: ercc6l - ENSDARG00000002479 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000002479
Nameercc6l
Descriptionexcision repair cross-complementation group 6-like [Source:ZFIN;Acc:ZDB-GENE-060531-56]
OrganismDanio rerio (zebrafish)
Synonym(s)a7e225, fc22h03, si:ch211-278b8.3, wu:fc22h03

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
2.80e3
  • 2.80e3
  • 3.76e3
  • 4.16e3
  • 4.60e3
  • 5.49e3
90.55039
  • 90.55039
  • 87.28119
  • 85.95241
  • 84.44595
  • 81.43748
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • UBERON:0000106zygote stage
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
2.98e3
  • 2.98e3
  • 3.77e3
  • 3.86e3
  • 4.46e3
  • 4.93e3
  • 5.51e3
  • 6.11e3
  • 6.22e3
  • 6.48e3
  • 6.58e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.91e3
  • 6.97e3
  • 7.40e3
  • 7.40e3
  • 7.52e3
  • 7.84e3
  • 8.22e3
  • 8.88e3
  • 8.88e3
  • 9.22e3
  • 1.01e4
  • 1.06e4
  • 1.10e4
  • 1.32e4
  • 1.38e4
  • 1.45e4
89.92910
  • 89.92910
  • 87.27692
  • 86.95741
  • 84.92954
  • 83.32826
  • 81.37501
  • 79.36614
  • 78.98964
  • 78.11654
  • 77.76763
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 76.65821
  • 76.46123
  • 74.99322
  • 74.99322
  • 74.59220
  • 73.51758
  • 72.20869
  • 69.98817
  • 69.98817
  • 68.84209
  • 65.73664
  • 64.03160
  • 62.98321
  • 55.28756
  • 53.43805
  • 50.89926
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
3.48e3
  • 3.48e3
  • 6.95e3
88.23538
  • 88.23538
  • 76.49965
AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
3.76e3
  • 3.76e3
87.28853
  • 87.28853
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
4.15e3
  • 4.15e3
  • 4.74e3
  • 5.78e3
  • 6.16e3
  • 7.29e3
  • 7.80e3
  • 7.85e3
  • 8.30e3
  • 8.52e3
  • 1.40e4
85.99361
  • 85.99361
  • 83.96904
  • 80.46775
  • 79.19031
  • 75.37439
  • 73.62628
  • 73.48178
  • 71.95261
  • 71.20301
  • 52.60352
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
4.20e3
  • 4.20e3
85.82124
  • 85.82124
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
4.37e3
  • 4.37e3
85.23375
  • 85.23375
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
4.62e3
  • 4.62e3
  • 4.91e3
  • 5.20e3
84.40502
  • 84.40502
  • 83.41189
  • 82.42820
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
5.26e3
  • 5.26e3
82.23585
  • 82.23585
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
5.39e3
  • 5.39e3
81.77415
  • 81.77415
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
5.52e3
  • 5.52e3
81.36274
  • 81.36274
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
7.13e3
  • 7.13e3
75.91782
  • 75.91782
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
7.78e3
  • 7.78e3
73.70301
  • 73.70301
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
7.83e3
  • 7.83e3
73.54199
  • 73.54199
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
8.56e3
  • 8.56e3
71.05775
  • 71.05775
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.28439
  • 64.28439
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.45684
  • 63.45684
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.08e4
  • 1.08e4
63.34206
  • 63.34206
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
61.00248
  • 61.00248
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.37720
  • 60.37720
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
58.86320
  • 58.86320
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
  • 1.53e4
57.53746
  • 57.53746
  • 48.24831
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.27e4
  • 1.27e4
57.12234
  • 57.12234
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
  • 2.14e4
56.82174
  • 56.82174
  • 27.55142
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
55.62165
  • 55.62165
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
1.34e4
  • 1.34e4
  • 1.35e4
  • 1.45e4
54.62255
  • 54.62255
  • 54.23582
  • 50.95554
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
47.98486
  • 47.98486
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
46.51953
  • 46.51953
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.80e4
  • 1.80e4
39.06703
  • 39.06703
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBC150168, BX510925, CR391924
EnsemblENSDARG00000002479 (ercc6l)
Uniprot/SWISSPROTA2BGR3, ERC6L_DANRE
ZFINZDB-GENE-060531-56 (ercc6l)

Do not show this banner again