D. rerio Gene: acsl4a - ENSDARG00000004078 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000004078
Nameacsl4a
Descriptionacyl-CoA synthetase long-chain family member 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1565]
OrganismDanio rerio (zebrafish)
Synonym(s)acsl4, acsl4b, zgc:66186
Orthologs(s)28 orthologs
Paralog(s)11 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
1.45e3
  • 1.45e3
  • 1.69e3
  • 3.03e3
  • 3.93e3
  • 6.12e3
  • 1.13e4
95.14
  • 95.14
  • 94.35
  • 89.87
  • 86.84
  • 79.50
  • 62.18
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:00072334 cell stage
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000018Gastrula:Germ-ring
  • UBERON:0000106zygote stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
1.47e3
  • 1.47e3
  • 1.69e3
  • 1.83e3
  • 2.15e3
  • 2.17e3
  • 3.17e3
  • 3.63e3
  • 3.70e3
  • 4.01e3
  • 4.27e3
  • 5.22e3
  • 5.30e3
  • 6.79e3
  • 6.79e3
  • 7.03e3
  • 7.10e3
  • 7.91e3
  • 8.16e3
  • 1.37e4
  • 1.40e4
  • 1.47e4
95.09
  • 95.09
  • 94.35
  • 93.86
  • 92.79
  • 92.74
  • 89.40
  • 87.85
  • 87.63
  • 86.59
  • 85.72
  • 82.53
  • 82.26
  • 77.27
  • 77.27
  • 76.46
  • 76.23
  • 73.52
  • 72.67
  • 54.18
  • 53.03
  • 50.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
1.60e3
  • 1.60e3
  • 2.08e3
  • 2.38e3
  • 3.24e3
  • 4.01e3
  • 4.03e3
  • 4.09e3
  • 4.23e3
  • 4.51e3
  • 6.64e3
94.63
  • 94.63
  • 93.04
  • 92.02
  • 89.15
  • 86.59
  • 86.51
  • 86.30
  • 85.83
  • 84.90
  • 77.78
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.61e3
  • 1.61e3
94.62
  • 94.62
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
2.23e3
  • 2.23e3
  • 2.57e3
  • 1.45e4
92.54
  • 92.54
  • 91.39
  • 51.33
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
2.66e3
  • 2.66e3
  • 4.28e3
91.09
  • 91.09
  • 85.68
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.78e3
  • 2.78e3
90.68
  • 90.68
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
2.80e3
  • 2.80e3
  • 3.34e3
  • 7.10e3
  • 8.40e3
90.62
  • 90.62
  • 88.80
  • 76.23
  • 71.88
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
3.10e3
  • 3.10e3
89.61
  • 89.61
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
3.16e3
  • 3.16e3
89.42
  • 89.42
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
3.22e3
  • 3.22e3
89.23
  • 89.23
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
3.47e3
  • 3.47e3
88.38
  • 88.38
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
4.48e3
  • 4.48e3
85.02
  • 85.02
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
4.69e3
  • 4.69e3
84.30
  • 84.30
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
4.76e3
  • 4.76e3
84.08
  • 84.08
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
4.82e3
  • 4.82e3
  • 5.22e3
  • 5.48e3
83.87
  • 83.87
  • 82.51
  • 81.64
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
4.93e3
  • 4.93e3
  • 8.09e3
83.48
  • 83.48
  • 72.92
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
5.06e3
  • 5.06e3
  • 5.60e3
  • 5.71e3
  • 7.19e3
  • 1.04e4
83.05
  • 83.05
  • 81.24
  • 80.87
  • 75.93
  • 65.12
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
5.12e3
  • 5.12e3
82.85
  • 82.85
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
5.13e3
  • 5.13e3
82.82
  • 82.82
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
5.33e3
  • 5.33e3
  • 1.37e4
82.17
  • 82.17
  • 54.27
AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
5.89e3
  • 5.89e3
80.28
  • 80.28
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.90e3
  • 5.90e3
80.25
  • 80.25
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
6.61e3
  • 6.61e3
77.88
  • 77.88
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
6.78e3
  • 6.78e3
77.31
  • 77.31
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
7.11e3
  • 7.11e3
76.20
  • 76.20
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.18e3
  • 7.18e3
75.95
  • 75.95
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
7.53e3
  • 7.53e3
74.77
  • 74.77
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.84e3
  • 7.84e3
73.76
  • 73.76
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
8.50e3
  • 8.50e3
71.55
  • 71.55
AEIR
  • AEIR
UBERON:2000088YSL
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
8.96e3
  • 8.96e3
  • 9.96e3
  • 1.05e4
  • 1.05e4
  • 1.07e4
  • 1.07e4
  • 1.07e4
  • 1.10e4
  • 1.10e4
  • 1.12e4
  • 1.14e4
  • 1.14e4
  • 1.23e4
  • 1.26e4
  • 1.28e4
69.99
  • 69.99
  • 66.65
  • 64.69
  • 64.69
  • 64.27
  • 64.27
  • 64.27
  • 63.32
  • 63.32
  • 62.48
  • 61.75
  • 61.75
  • 58.80
  • 57.68
  • 57.13
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001017central nervous system
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000036Larval:Day 4
1.02e4
  • 1.02e4
  • 1.03e4
  • 1.07e4
  • 1.17e4
  • 1.20e4
  • 1.23e4
  • 1.23e4
  • 1.28e4
  • 1.49e4
65.77
  • 65.77
  • 65.37
  • 64.27
  • 60.70
  • 59.98
  • 58.80
  • 58.80
  • 57.13
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001555digestive tract
  • ZFS:0000036Larval:Day 4
1.07e4
  • 1.07e4
64.28
  • 64.28
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
1.10e4
  • 1.10e4
  • 1.17e4
63.32
  • 63.32
  • 60.70
AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.14e4
  • 1.14e4
  • 1.14e4
61.75
  • 61.75
  • 61.75
AEIR
  • AEIR
  • AEIR
UBERON:0001905pineal body
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.20e4
  • 1.20e4
  • 1.21e4
  • 1.21e4
  • 1.21e4
  • 1.25e4
59.98
  • 59.98
  • 59.50
  • 59.36
  • 59.36
  • 58.31
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi19 species19 genesCompare expression
Bilateria26 species28 genesCompare expression

Orthology information comes from OMA : ENSDARG00000004078.

Paralogs (same species)

Cross-references

EnsemblENSDARG00000004078 (acsl4a)
ZFINZDB-GENE-040426-1565 (acsl4a)
EMBLBX088535, CU234140
Uniprot/SPTREMBLF1R452, F1R452_DANRE

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