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D. rerio Gene: rhogb - ENSDARG00000004301 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000004301
Namerhogb
Descriptionras homolog family member Gb [Source:ZFIN;Acc:ZDB-GENE-030131-8877]
OrganismDanio rerio (zebrafish)
Synonym(s)arhg, rho g, rhog, wu:fk30f01, zgc:55848
Paralog(s)100 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
767
  • 767
97.43
  • 97.43
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.78e3
  • 1.78e3
94.04
  • 94.04
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.32e3
  • 2.32e3
92.24
  • 92.24
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
3.37e3
  • 3.37e3
88.72
  • 88.72
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
4.41e3
  • 4.41e3
85.23
  • 85.23
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.95e3
  • 4.95e3
83.44
  • 83.44
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.79e3
  • 5.79e3
80.61
  • 80.61
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
6.85e3
  • 6.85e3
77.08
  • 77.08
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
7.32e3
  • 7.32e3
  • 9.50e3
75.50
  • 75.50
  • 68.18
AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
8.54e3
  • 8.54e3
  • 8.96e3
  • 1.14e4
  • 1.20e4
  • 1.25e4
  • 1.25e4
  • 1.25e4
  • 1.27e4
71.42
  • 71.42
  • 69.99
  • 61.88
  • 59.98
  • 58.31
  • 58.31
  • 58.31
  • 57.47
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
8.67e3
  • 8.67e3
70.98
  • 70.98
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
9.58e3
  • 9.58e3
  • 1.02e4
67.92
  • 67.92
  • 65.69
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
9.78e3
  • 9.78e3
67.26
  • 67.26
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
9.92e3
  • 9.92e3
66.77
  • 66.77
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.08
  • 65.08
AEIR
  • AEIR
CL:0000235macrophage
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
1.07e4
  • 1.07e4
  • 1.07e4
  • 1.19e4
  • 1.33e4
  • 1.49e4
  • 1.49e4
64.28
  • 64.28
  • 64.28
  • 59.99
  • 55.55
  • 50.00
  • 49.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.10e4
  • 1.10e4
  • 1.59e4
63.04
  • 63.04
  • 46.60
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.96
  • 62.96
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
1.15e4
  • 1.15e4
  • 1.18e4
  • 1.41e4
  • 1.46e4
  • 1.47e4
  • 1.48e4
  • 1.61e4
  • 1.75e4
  • 1.78e4
  • 1.78e4
61.56
  • 61.56
  • 60.63
  • 52.63
  • 50.98
  • 50.93
  • 50.59
  • 46.01
  • 41.29
  • 40.40
  • 40.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.17e4
  • 1.17e4
  • 1.47e4
  • 1.66e4
60.76
  • 60.76
  • 50.66
  • 44.48
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.38e4
  • 1.38e4
53.94
  • 53.94
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
1.38e4
  • 1.38e4
  • 1.49e4
  • 1.75e4
53.77
  • 53.77
  • 49.94
  • 41.42
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.42e4
  • 1.42e4
52.59
  • 52.59
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • UBERON:0000066fully formed stage
1.42e4
  • 1.42e4
52.57
  • 52.57
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000066fully formed stage
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.46e4
  • 1.46e4
  • 1.67e4
  • 1.67e4
  • 1.73e4
  • 1.74e4
  • 1.77e4
  • 1.78e4
  • 1.78e4
  • 1.78e4
  • 1.78e4
  • 1.78e4
  • 1.79e4
  • 1.81e4
  • 1.83e4
51.12
  • 51.12
  • 44.21
  • 43.93
  • 42.04
  • 41.87
  • 40.62
  • 40.56
  • 40.55
  • 40.43
  • 40.38
  • 40.38
  • 40.18
  • 39.42
  • 38.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.49e4
  • 1.49e4
  • 1.68e4
50.26
  • 50.26
  • 43.77
AEIR
  • AEIR
  • AEIR
UBERON:2000732somite 3
  • ZFS:0000026Segmentation:14-19 somites
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:2000857somite 4
  • ZFS:0000026Segmentation:14-19 somites
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0005805dorsal aorta
  • ZFS:0000030Pharyngula:Prim-15
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.61e4
  • 1.61e4
46.16
  • 46.16
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
1.70e4
  • 1.70e4
43.04
  • 43.04
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.81e4
  • 1.81e4
39.41
  • 39.41
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Vertebrata2 genesCompare expression
Eukaryota100 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000004301.

Cross-references

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