Gene: mpp5b - ENSDARG00000004721 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000004721
Name	mpp5b
Description	membrane protein, palmitoylated 5b (MAGUK p55 subfamily member 5) [Source:ZFIN;Acc:ZDB-GENE-060531-2]
Organism	Danio rerio (zebrafish)
Synonym(s)	ponli, si:ch211-105d18.1
Orthologs(s)	1 orthologs
Paralog(s)	8 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000966	retina	[+] 1 stage ZFS:0000037Larval:Day 5	2.50e3 2.50e3	91.63 91.63	AEIR AEIR
UBERON:0000468	multi-cellular organism	[+] 3 stages ZFS:0000019Gastrula:Shield ZFS:0000011Blastula:1k-cell ZFS:0000015Blastula:Dome	5.77e3 5.77e3 1.22e4 1.24e4	80.67 80.67 59.08 58.32	AEIR AEIR AEIR AEIR
UBERON:0000307	blastula	[+] 2 stages ZFS:0000015Blastula:Dome ZFS:0000011Blastula:1k-cell	1.08e4 1.08e4 1.14e4	63.77 63.77 61.87	AEIR AEIR AEIR
UBERON:0019248	early embryo	[+] 1 stage UBERON:0000107cleavage stage	1.09e4 1.09e4	63.50 63.50	AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	1.40e4 1.40e4	53.23 53.23	AEIR AEIR
UBERON:0000033	head	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000066fully formed stage	1.42e4 1.42e4 1.56e4	52.39 52.39 47.89	AEIR AEIR AEIR
UBERON:0004734	gastrula	[+] 1 stage ZFS:0000019Gastrula:Shield	1.46e4 1.46e4	51.24 51.24	AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000066fully formed stage	1.46e4 1.46e4	50.97 50.97	AEIR AEIR
UBERON:0000922	embryo	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000068embryo stage	1.53e4 1.53e4 2.34e4	48.69 48.69 21.61	AEIR AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	1.60e4 1.60e4	46.46 46.46	AEIR AEIR
UBERON:0002548	larva	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000069larval stage	1.79e4 1.79e4 2.38e4	40.00 40.00 20.23	AEIR AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	1.84e4 1.84e4	38.53 38.53	AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	2.28e4 2.28e4	23.69 23.69	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	2.47e4 2.47e4	17.30 17.30	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

In situ hybridization data: ZFIN
RNA-Seq data: Bgee

Sources of raw data:

In situ hybridization data: ZFIN
RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Bilateria	1 species Caenorhabditis elegans (nematode)	1 gene WBGene00006467 magu-2	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000004721.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Eumetazoa	1 gene ENSDARG00000006272 mpp5a	Compare expression	[+]
Opisthokonta	8 genes ENSDARG00000006272 mpp5a ENSDARG00000009386 MPP4 (1 to many) ENSDARG00000015184 mpp3a ENSDARG00000058222 mpp4a ENSDARG00000062667 mpp3b ENSDARG00000076872 MPP4 (1 to many) ENSDARG00000102470 mpp7a ENSDARG00000105287 mpp1	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000004721.

Cross-references

Ensembl	ENSDARG00000004721 (mpp5b)
ZFIN	ZDB-GENE-060531-2 (mpp5b)
EMBL	AL928824
Uniprot/SPTREMBL	F1R2J9, F1R2J9_DANRE