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D. rerio Gene: mpp5b - ENSDARG00000004721 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000004721
Namempp5b
Descriptionmembrane protein, palmitoylated 5b (MAGUK p55 subfamily member 5) [Source:ZFIN;Acc:ZDB-GENE-060531-2]
OrganismDanio rerio (zebrafish)
Synonym(s)ponli, si:ch211-105d18.1
Orthologs(s)1 orthologs
Paralog(s)8 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
2.50e3
  • 2.50e3
91.63
  • 91.63
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
5.77e3
  • 5.77e3
  • 1.22e4
  • 1.24e4
80.67
  • 80.67
  • 59.08
  • 58.32
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
1.08e4
  • 1.08e4
  • 1.14e4
63.77
  • 63.77
  • 61.87
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.09e4
  • 1.09e4
63.50
  • 63.50
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.40e4
  • 1.40e4
53.23
  • 53.23
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.42e4
  • 1.42e4
  • 1.56e4
52.39
  • 52.39
  • 47.89
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
1.46e4
  • 1.46e4
51.24
  • 51.24
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
50.97
  • 50.97
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
1.53e4
  • 1.53e4
  • 2.34e4
48.69
  • 48.69
  • 21.61
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.60e4
  • 1.60e4
46.46
  • 46.46
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.79e4
  • 1.79e4
  • 2.38e4
40.00
  • 40.00
  • 20.23
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.84e4
  • 1.84e4
38.53
  • 38.53
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.28e4
  • 2.28e4
23.69
  • 23.69
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.47e4
  • 2.47e4
17.30
  • 17.30
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Bilateria1 species1 geneCompare expression

Orthology information comes from OMA : ENSDARG00000004721.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eumetazoa1 geneCompare expression
Opisthokonta8 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000004721.

Cross-references

EnsemblENSDARG00000004721 (mpp5b)
ZFINZDB-GENE-060531-2 (mpp5b)
EMBLAL928824
Uniprot/SPTREMBLF1R2J9, F1R2J9_DANRE

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