D. rerio Gene: ccdc146 - ENSDARG00000004794 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000004794
Nameccdc146
Descriptioncoiled-coil domain containing 146 [Source:ZFIN;Acc:ZDB-GENE-041210-217]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-276e22.2, zgc:152979
Orthologs(s)18 orthologs
Paralog(s)439 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.37e3
  • 1.37e3
95.40
  • 95.40
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.81e3
  • 6.81e3
77.21
  • 77.21
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
9.15e3
  • 9.15e3
69.36
  • 69.36
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.24
  • 65.24
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.83
  • 64.83
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.09e4
  • 1.09e4
  • 1.11e4
63.51
  • 63.51
  • 62.75
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
61.47
  • 61.47
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.14
  • 61.14
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.29e4
  • 1.29e4
56.89
  • 56.89
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
1.44e4
  • 1.44e4
  • 1.75e4
51.76
  • 51.76
  • 41.42
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000066fully formed stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.49e4
  • 1.49e4
  • 1.78e4
  • 1.79e4
  • 1.81e4
  • 1.83e4
50.25
  • 50.25
  • 40.38
  • 40.18
  • 39.42
  • 38.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.07
  • 50.07
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.02
  • 50.02
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.56e4
  • 1.56e4
47.63
  • 47.63
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
46.85
  • 46.85
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.65e4
  • 1.65e4
44.88
  • 44.88
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.68e4
  • 1.68e4
43.85
  • 43.85
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.70e4
  • 1.70e4
43.13
  • 43.13
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.70e4
  • 1.70e4
42.96
  • 42.96
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
1.75e4
  • 1.75e4
  • 1.82e4
  • 1.86e4
  • 1.88e4
  • 2.08e4
41.43
  • 41.43
  • 39.17
  • 37.72
  • 37.13
  • 30.25
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.83e4
  • 1.83e4
  • 1.89e4
  • 2.11e4
38.83
  • 38.83
  • 36.63
  • 29.31
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.84e4
  • 1.84e4
  • 2.02e4
38.36
  • 38.36
  • 32.29
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.85e4
  • 1.85e4
38.15
  • 38.15
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eukaryota439 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000004794.

Cross-references

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