D. rerio Gene: zgc:86764 - ENSDARG00000005098 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000005098
Namezgc:86764
Descriptionzgc:86764 [Source:ZFIN;Acc:ZDB-GENE-040718-435]
OrganismDanio rerio (zebrafish)
Synonym(s)wu:fc21a03
Orthologs(s)13 orthologs
Paralog(s)439 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
442
  • 442
98.52
  • 98.52
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
539
  • 539
98.20
  • 98.20
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
761
  • 761
  • 1.01e3
  • 1.14e3
  • 4.05e3
  • 4.38e3
97.46
  • 97.46
  • 96.62
  • 96.19
  • 86.45
  • 85.32
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
772
  • 772
97.42
  • 97.42
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
961
  • 961
  • 3.53e3
  • 3.76e3
  • 4.32e3
  • 4.46e3
  • 4.47e3
  • 4.49e3
  • 4.58e3
  • 4.75e3
  • 5.06e3
  • 9.04e3
  • 9.06e3
  • 1.05e4
  • 1.14e4
  • 1.43e4
  • 1.50e4
96.79
  • 96.79
  • 88.19
  • 87.42
  • 85.54
  • 85.06
  • 85.04
  • 84.96
  • 84.66
  • 84.08
  • 83.07
  • 69.73
  • 69.68
  • 64.76
  • 61.89
  • 52.23
  • 49.81
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.70e3
  • 1.70e3
94.31
  • 94.31
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
3.01e3
  • 3.01e3
89.93
  • 89.93
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
3.18e3
  • 3.18e3
  • 3.74e3
89.35
  • 89.35
  • 87.49
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
3.41e3
  • 3.41e3
  • 4.04e3
  • 4.31e3
  • 4.74e3
  • 4.76e3
  • 5.20e3
  • 5.55e3
  • 6.43e3
  • 7.58e3
  • 1.19e4
88.58
  • 88.58
  • 86.46
  • 85.57
  • 84.14
  • 84.07
  • 82.60
  • 81.41
  • 78.46
  • 74.63
  • 60.03
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
4.49e3
  • 4.49e3
84.96
  • 84.96
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
4.55e3
  • 4.55e3
84.76
  • 84.76
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
4.66e3
  • 4.66e3
84.40
  • 84.40
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
4.73e3
  • 4.73e3
  • 4.91e3
  • 5.09e3
  • 5.11e3
  • 5.20e3
  • 5.28e3
84.18
  • 84.18
  • 83.55
  • 82.94
  • 82.89
  • 82.57
  • 82.33
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
4.93e3
  • 4.93e3
  • 1.76e4
83.49
  • 83.49
  • 41.15
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
4.94e3
  • 4.94e3
83.45
  • 83.45
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
4.99e3
  • 4.99e3
83.29
  • 83.29
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
5.11e3
  • 5.11e3
82.88
  • 82.88
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
5.27e3
  • 5.27e3
82.37
  • 82.37
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
5.83e3
  • 5.83e3
80.49
  • 80.49
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.36e3
  • 7.36e3
75.37
  • 75.37
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.68e3
  • 7.68e3
74.29
  • 74.29
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
7.78e3
  • 7.78e3
73.95
  • 73.95
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
8.91e3
  • 8.91e3
  • 1.10e4
  • 1.26e4
70.16
  • 70.16
  • 63.11
  • 57.92
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
8.92e3
  • 8.92e3
  • 2.17e4
70.13
  • 70.13
  • 27.48
AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
9.01e3
  • 9.01e3
69.83
  • 69.83
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
9.14e3
  • 9.14e3
  • 1.29e4
69.38
  • 69.38
  • 56.68
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
9.22e3
  • 9.22e3
69.13
  • 69.13
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.74
  • 50.74
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.40
  • 50.40
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.10
  • 50.10
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
46.70
  • 46.70
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
43.56
  • 43.56
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.92e4
  • 1.92e4
35.87
  • 35.87
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Bilateria2 genesCompare expression
Eukaryota439 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000005098.

Cross-references

EnsemblENSDARG00000005098 (zgc:86764)
ZFINZDB-GENE-040718-435 (zgc:86764)
EMBLBX511179
Uniprot/SPTREMBLF1QCL3, F1QCL3_DANRE

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