D. rerio Gene: desmb - ENSDARG00000005221 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000005221
Namedesmb
Descriptiondesmin b [Source:ZFIN;Acc:ZDB-GENE-061027-102]
OrganismDanio rerio (zebrafish)
Synonym(s)wu:fc11d08, zgc:154009
Orthologs(s)17 orthologs
Paralog(s)8 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.20e3
  • 1.20e3
95.99
  • 95.99
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
3.59e3
  • 3.59e3
87.97
  • 87.97
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
6.51e3
  • 6.51e3
78.22
  • 78.22
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
6.87e3
  • 6.87e3
  • 1.31e4
  • 1.51e4
77.01
  • 77.01
  • 56.15
  • 49.57
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
8.53e3
  • 8.53e3
  • 1.85e4
  • 2.42e4
71.44
  • 71.44
  • 37.92
  • 19.11
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000033Hatching:Long-pec
1.02e4
  • 1.02e4
  • 1.14e4
  • 1.48e4
  • 1.50e4
  • 1.50e4
  • 1.77e4
  • 1.78e4
  • 1.81e4
65.99
  • 65.99
  • 61.75
  • 50.50
  • 49.92
  • 49.81
  • 40.76
  • 40.38
  • 39.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
59.52
  • 59.52
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.24e4
  • 1.24e4
  • 1.86e4
58.34
  • 58.34
  • 37.71
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.45e4
  • 1.45e4
51.44
  • 51.44
AEIR
  • AEIR
UBERON:0002201vasculature of trunk
  • ZFS:0000035Larval:Protruding-mouth
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0011362cranial blood vasculature
  • ZFS:0000035Larval:Protruding-mouth
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.55e4
  • 1.55e4
48.06
  • 48.06
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.62e4
  • 1.62e4
45.77
  • 45.77
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.69e4
  • 1.69e4
  • 1.83e4
43.54
  • 43.54
  • 38.63
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.72e4
  • 1.72e4
42.46
  • 42.46
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.75e4
  • 1.75e4
41.43
  • 41.43
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
1.75e4
  • 1.75e4
  • 1.81e4
41.42
  • 41.42
  • 39.27
AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.77
  • 40.77
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.03e4
  • 2.03e4
32.07
  • 32.07
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.31e4
  • 2.31e4
22.73
  • 22.73
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata8 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000005221.

Cross-references

EnsemblENSDARG00000005221 (desmb)
ZFINZDB-GENE-061027-102 (desmb)
EMBLCU652701
Uniprot/SPTREMBLF1QK59, F1QK59_DANRE

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