D. rerio Gene: celf1 - ENSDARG00000005315 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000005315
Namecelf1
Descriptioncugbp, Elav-like family member 1 [Source:ZFIN;Acc:ZDB-GENE-000501-1]
OrganismDanio rerio (zebrafish)
Synonym(s)brul, bruno-like, cb920, cugbp1, q7zwe4

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
440
  • 440
98.51622
  • 98.51622
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.10e3
  • 1.10e3
  • 1.59e3
  • 1.65e3
  • 1.86e3
  • 1.86e3
  • 2.50e3
  • 2.50e3
  • 3.38e3
  • 4.99e3
  • 6.80e3
96.29223
  • 96.29223
  • 94.63945
  • 94.41982
  • 93.71316
  • 93.70618
  • 91.55767
  • 91.55071
  • 88.59093
  • 83.14836
  • 77.01215
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000106zygote stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0000109gastrula stage
1.29e3
  • 1.29e3
  • 1.30e3
  • 1.42e3
  • 1.55e3
  • 2.35e3
  • 2.37e3
  • 2.41e3
  • 2.45e3
  • 2.53e3
  • 2.70e3
  • 3.03e3
  • 3.11e3
  • 3.19e3
  • 3.63e3
  • 1.34e4
  • 1.37e4
  • 1.45e4
  • 1.48e4
95.63581
  • 95.63581
  • 95.60075
  • 95.21766
  • 94.75044
  • 92.06016
  • 91.98765
  • 91.84527
  • 91.71628
  • 91.43551
  • 90.89362
  • 89.75720
  • 89.50003
  • 89.21221
  • 87.73456
  • 54.61024
  • 53.84297
  • 50.89926
  • 49.99493
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.43e3
  • 1.43e3
95.17685
  • 95.17685
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.10e3
  • 2.10e3
92.91231
  • 92.91231
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
2.17e3
  • 2.17e3
92.66059
  • 92.66059
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
2.19e3
  • 2.19e3
92.60937
  • 92.60937
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
2.30e3
  • 2.30e3
  • 2.40e3
  • 3.02e3
  • 3.36e3
  • 4.53e3
92.23545
  • 92.23545
  • 91.90773
  • 89.80738
  • 88.66270
  • 84.69251
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
2.33e3
  • 2.33e3
  • 3.49e3
92.13831
  • 92.13831
  • 88.19327
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.34e3
  • 2.34e3
92.10670
  • 92.10670
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.35e3
  • 2.35e3
92.07071
  • 92.07071
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
2.38e3
  • 2.38e3
91.97448
  • 91.97448
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
2.47e3
  • 2.47e3
  • 1.30e4
  • 1.38e4
91.65361
  • 91.65361
  • 56.21790
  • 53.40601
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
2.55e3
  • 2.55e3
91.38120
  • 91.38120
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.76e3
  • 2.76e3
90.68832
  • 90.68832
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
2.77e3
  • 2.77e3
90.63833
  • 90.63833
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
2.86e3
  • 2.86e3
90.34515
  • 90.34515
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.89e3
  • 2.89e3
90.25231
  • 90.25231
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.94e3
  • 2.94e3
90.06033
  • 90.06033
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
2.96e3
  • 2.96e3
90.01531
  • 90.01531
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
3.15e3
  • 3.15e3
  • 3.94e3
  • 5.12e3
89.36910
  • 89.36910
  • 86.67916
  • 82.71049
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
3.15e3
  • 3.15e3
89.36677
  • 89.36677
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
3.39e3
  • 3.39e3
88.54690
  • 88.54690
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
3.40e3
  • 3.40e3
88.52855
  • 88.52855
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
3.56e3
  • 3.56e3
  • 1.34e4
  • 1.35e4
87.95618
  • 87.95618
  • 54.73317
  • 54.51503
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
4.00e3
  • 4.00e3
  • 4.19e3
86.49445
  • 86.49445
  • 85.84216
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
4.50e3
  • 4.50e3
  • 4.70e3
  • 5.07e3
84.78725
  • 84.78725
  • 84.10833
  • 82.87256
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
4.84e3
  • 4.84e3
  • 5.51e3
83.65817
  • 83.65817
  • 81.38068
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
5.99e3
  • 5.99e3
79.77434
  • 79.77434
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • UBERON:00072334 cell stage
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
6.34e3
  • 6.34e3
  • 9.87e3
  • 1.13e4
  • 1.18e4
  • 1.22e4
  • 1.23e4
  • 1.23e4
78.56975
  • 78.56975
  • 66.65990
  • 61.88109
  • 59.97634
  • 58.80324
  • 58.31136
  • 58.31136
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
6.61e3
  • 6.61e3
  • 7.48e3
  • 7.92e3
77.67531
  • 77.67531
  • 74.72242
  • 73.22269
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005426lens vesicle
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.04e4
  • 1.04e4
  • 1.13e4
  • 1.20e4
64.97970
  • 64.97970
  • 61.74610
  • 59.35640
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003082myotome
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.18e4
  • 1.18e4
  • 1.23e4
  • 1.23e4
59.97634
  • 59.97634
  • 58.31136
  • 58.31136
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000151pectoral fin
  • ZFS:0000033Hatching:Long-pec
1.20e4
  • 1.20e4
59.35640
  • 59.35640
AEIR
  • AEIR
UBERON:0000965lens of camera-type eye
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.27e4
  • 1.27e4
  • 1.28e4
  • 1.32e4
  • 1.33e4
57.12595
  • 57.12595
  • 56.64807
  • 55.23779
  • 54.97294
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002533post-anal tail bud
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
1.32e4
  • 1.32e4
  • 1.40e4
55.53188
  • 55.53188
  • 52.75244
AEIR
  • AEIR
  • AEIR
UBERON:0007269pectoral appendage musculature
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
1.32e4
  • 1.32e4
  • 1.32e4
55.23779
  • 55.23779
  • 55.23779
AEIR
  • AEIR
  • AEIR
UBERON:0003073lens placode
  • ZFS:0000026Segmentation:14-19 somites
1.48e4
  • 1.48e4
49.98817
  • 49.98817
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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