D. rerio Gene: csnk1db - ENSDARG00000006125 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000006125
Namecsnk1db
Descriptioncasein kinase 1, delta b [Source:ZFIN;Acc:ZDB-GENE-040426-2385]
OrganismDanio rerio (zebrafish)
Synonym(s)csnk1d, q4v962, wu:fb69b03, wu:fj97a05, zgc:77627
Orthologs(s)6 orthologs
Paralog(s)439 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
314
  • 314
98.95
  • 98.95
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
515
  • 515
98.28
  • 98.28
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000036Larval:Day 4
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000037Larval:Day 5
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000014Blastula:Sphere
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
704
  • 704
  • 2.30e3
  • 2.34e3
  • 2.34e3
  • 2.52e3
  • 2.74e3
  • 3.04e3
  • 3.18e3
  • 3.40e3
  • 3.55e3
  • 3.62e3
  • 3.65e3
  • 3.97e3
  • 4.90e3
  • 5.69e3
  • 6.79e3
  • 7.47e3
  • 7.47e3
  • 7.97e3
  • 8.96e3
  • 1.36e4
  • 1.40e4
  • 1.50e4
97.65
  • 97.65
  • 92.31
  • 92.18
  • 92.17
  • 91.56
  • 90.84
  • 89.83
  • 89.36
  • 88.63
  • 88.11
  • 87.88
  • 87.77
  • 86.72
  • 83.60
  • 80.95
  • 77.27
  • 74.99
  • 74.99
  • 73.32
  • 69.99
  • 54.61
  • 53.03
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
861
  • 861
  • 1.29e3
  • 3.83e3
  • 5.61e3
97.12
  • 97.12
  • 95.67
  • 87.17
  • 81.22
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
1.06e3
  • 1.06e3
  • 1.99e3
  • 2.23e3
  • 2.37e3
  • 2.59e3
96.45
  • 96.45
  • 93.32
  • 92.54
  • 92.05
  • 91.31
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.25e3
  • 1.25e3
95.82
  • 95.82
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.27e3
  • 1.27e3
95.75
  • 95.75
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.30e3
  • 1.30e3
95.64
  • 95.64
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.38e3
  • 1.38e3
95.40
  • 95.40
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.65e3
  • 1.65e3
94.46
  • 94.46
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.68e3
  • 1.68e3
  • 2.73e3
  • 2.87e3
  • 3.32e3
  • 3.33e3
  • 3.66e3
  • 4.23e3
  • 4.91e3
  • 4.97e3
  • 5.21e3
94.39
  • 94.39
  • 90.87
  • 90.40
  • 88.89
  • 88.85
  • 87.74
  • 85.82
  • 83.58
  • 83.35
  • 82.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.69e3
  • 1.69e3
  • 2.23e3
  • 3.43e3
94.36
  • 94.36
  • 92.55
  • 88.52
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.77e3
  • 1.77e3
94.06
  • 94.06
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
1.84e3
  • 1.84e3
  • 3.05e3
  • 1.21e4
93.85
  • 93.85
  • 89.80
  • 59.59
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
1.89e3
  • 1.89e3
  • 2.01e3
  • 2.21e3
  • 2.50e3
  • 2.86e3
  • 2.97e3
93.69
  • 93.69
  • 93.27
  • 92.62
  • 91.65
  • 90.42
  • 90.07
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.91e3
  • 1.91e3
  • 3.39e3
93.62
  • 93.62
  • 88.64
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.98e3
  • 1.98e3
  • 3.72e3
93.38
  • 93.38
  • 87.56
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
2.12e3
  • 2.12e3
92.90
  • 92.90
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.33e3
  • 2.33e3
92.19
  • 92.19
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.35e3
  • 2.35e3
92.13
  • 92.13
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.52e3
  • 2.52e3
91.55
  • 91.55
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.84e3
  • 2.84e3
90.49
  • 90.49
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
2.84e3
  • 2.84e3
90.48
  • 90.48
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.89e3
  • 2.89e3
90.34
  • 90.34
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
2.93e3
  • 2.93e3
90.18
  • 90.18
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
3.15e3
  • 3.15e3
89.47
  • 89.47
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
3.67e3
  • 3.67e3
87.70
  • 87.70
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
4.16e3
  • 4.16e3
86.07
  • 86.07
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
4.32e3
  • 4.32e3
85.54
  • 85.54
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.85e3
  • 6.85e3
77.06
  • 77.06
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
9.34e3
  • 9.34e3
68.72
  • 68.72
AEIR
  • AEIR
UBERON:0002328notochord
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
1.05e4
  • 1.05e4
  • 1.37e4
  • 1.42e4
  • 1.43e4
  • 1.43e4
64.99
  • 64.99
  • 53.96
  • 52.47
  • 52.24
  • 52.24
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
1.25e4
  • 1.25e4
  • 1.31e4
58.31
  • 58.31
  • 56.23
AEIR
  • AEIR
  • AEIR
UBERON:0001891midbrain
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
1.28e4
  • 1.28e4
  • 1.32e4
  • 1.34e4
57.12
  • 57.12
  • 55.86
  • 54.97
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005425presumptive neural retina
  • ZFS:0000029Pharyngula:Prim-5
1.31e4
  • 1.31e4
56.24
  • 56.24
AEIR
  • AEIR
UBERON:0001893telencephalon
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000031Pharyngula:Prim-25
1.31e4
  • 1.31e4
  • 1.34e4
  • 1.42e4
56.22
  • 56.22
  • 55.24
  • 52.60
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001894diencephalon
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000031Pharyngula:Prim-25
1.31e4
  • 1.31e4
  • 1.33e4
  • 1.36e4
56.22
  • 56.22
  • 55.53
  • 54.52
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002028hindbrain
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
1.34e4
  • 1.34e4
  • 1.42e4
54.97
  • 54.97
  • 52.47
AEIR
  • AEIR
  • AEIR
UBERON:0007135neural keel
  • ZFS:0000022Gastrula:Bud
1.36e4
  • 1.36e4
54.53
  • 54.53
AEIR
  • AEIR
UBERON:0003075neural plate
  • ZFS:0000020Gastrula:75%-epiboly
1.38e4
  • 1.38e4
53.83
  • 53.83
AEIR
  • AEIR
UBERON:0001943midbrain tegmentum
  • ZFS:0000033Hatching:Long-pec
1.40e4
  • 1.40e4
53.10
  • 53.10
AEIR
  • AEIR
UBERON:0001892rhombomere
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
1.49e4
  • 1.49e4
  • 1.49e4
49.99
  • 49.99
  • 49.98
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Bilateria6 species6 genesCompare expression

Orthology information comes from OMA : ENSDARG00000006125.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression
Opisthokonta3 genesCompare expression
Eukaryota439 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000006125.

Cross-references

EnsemblENSDARG00000006125 (csnk1db)
ZFINZDB-GENE-040426-2385 (csnk1db)
EMBLBC063953, BC097045, EU127825
Uniprot/SWISSPROTKC1DB_DANRE, Q6P3K7

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