D. rerio Gene: csnk1db - ENSDARG00000006125 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000006125
Namecsnk1db
Descriptioncasein kinase 1, delta b [Source:ZFIN;Acc:ZDB-GENE-040426-2385]
OrganismDanio rerio (zebrafish)
Synonym(s)csnk1d, q4v962, wu:fb69b03, wu:fj97a05, zgc:77627

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
515
  • 515
98.26272
  • 98.26272
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000036Larval:Day 4
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000037Larval:Day 5
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000014Blastula:Sphere
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
699
  • 699
  • 2.28e3
  • 2.32e3
  • 2.32e3
  • 2.50e3
  • 2.72e3
  • 3.02e3
  • 3.16e3
  • 3.37e3
  • 3.53e3
  • 3.59e3
  • 3.63e3
  • 3.94e3
  • 4.86e3
  • 5.64e3
  • 6.73e3
  • 7.40e3
  • 7.40e3
  • 7.89e3
  • 8.88e3
  • 1.34e4
  • 1.39e4
  • 1.48e4
97.64002
  • 97.64002
  • 92.29782
  • 92.16309
  • 92.15750
  • 91.54093
  • 90.82098
  • 89.80455
  • 89.33439
  • 88.60511
  • 88.08584
  • 87.85376
  • 87.74029
  • 86.69218
  • 83.56267
  • 80.94611
  • 77.26767
  • 74.99491
  • 74.99322
  • 73.32320
  • 69.98817
  • 54.61024
  • 53.03314
  • 49.91719
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
855
  • 855
  • 3.80e3
  • 5.57e3
97.11365
  • 97.11365
  • 87.14686
  • 81.17868
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.18e3
  • 1.18e3
  • 2.06e3
96.00831
  • 96.00831
  • 93.04955
AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.24e3
  • 1.24e3
95.81225
  • 95.81225
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.27e3
  • 1.27e3
95.71088
  • 95.71088
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.28e3
  • 1.28e3
  • 1.95e3
  • 3.40e3
95.69226
  • 95.69226
  • 93.42724
  • 88.49736
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.30e3
  • 1.30e3
95.59596
  • 95.59596
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.38e3
  • 1.38e3
95.35599
  • 95.35599
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.68e3
  • 1.68e3
  • 2.72e3
  • 2.83e3
  • 3.29e3
  • 3.32e3
  • 3.66e3
  • 4.20e3
  • 4.87e3
  • 4.94e3
  • 5.17e3
94.33735
  • 94.33735
  • 90.80112
  • 90.43483
  • 88.86989
  • 88.77207
  • 87.62611
  • 85.79339
  • 83.54114
  • 83.31029
  • 82.53220
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.89e3
  • 1.89e3
  • 3.37e3
93.60683
  • 93.60683
  • 88.61405
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
1.92e3
  • 1.92e3
  • 1.20e4
93.51807
  • 93.51807
  • 59.59010
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.02e3
  • 2.02e3
93.17151
  • 93.17151
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
2.12e3
  • 2.12e3
92.83119
  • 92.83119
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000022Gastrula:Bud
2.19e3
  • 2.19e3
  • 2.48e3
  • 2.84e3
  • 2.94e3
  • 3.89e3
92.59902
  • 92.59902
  • 91.62760
  • 90.40329
  • 90.05134
  • 86.84420
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
2.21e3
  • 2.21e3
  • 2.36e3
  • 2.58e3
92.52821
  • 92.52821
  • 92.03343
  • 91.29606
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.29e3
  • 2.29e3
92.26336
  • 92.26336
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.33e3
  • 2.33e3
92.12141
  • 92.12141
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.35e3
  • 2.35e3
92.06057
  • 92.06057
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.52e3
  • 2.52e3
91.47246
  • 91.47246
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
2.79e3
  • 2.79e3
  • 3.69e3
90.58500
  • 90.58500
  • 87.52817
AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
2.82e3
  • 2.82e3
90.45805
  • 90.45805
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.89e3
  • 2.89e3
90.25017
  • 90.25017
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
3.15e3
  • 3.15e3
89.37056
  • 89.37056
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
3.57e3
  • 3.57e3
87.95120
  • 87.95120
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
3.65e3
  • 3.65e3
87.67566
  • 87.67566
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
4.13e3
  • 4.13e3
86.03770
  • 86.03770
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
4.29e3
  • 4.29e3
85.50464
  • 85.50464
AEIR
  • AEIR
UBERON:0002328notochord
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
1.04e4
  • 1.04e4
  • 1.36e4
  • 1.41e4
  • 1.41e4
  • 1.41e4
64.99153
  • 64.99153
  • 53.96451
  • 52.47126
  • 52.24062
  • 52.24062
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
1.23e4
  • 1.23e4
  • 1.30e4
58.31136
  • 58.31136
  • 56.22973
AEIR
  • AEIR
  • AEIR
UBERON:0001891midbrain
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
1.27e4
  • 1.27e4
  • 1.31e4
  • 1.33e4
57.11581
  • 57.11581
  • 55.86038
  • 54.97294
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005425presumptive neural retina
  • ZFS:0000029Pharyngula:Prim-5
1.29e4
  • 1.29e4
56.24156
  • 56.24156
AEIR
  • AEIR
UBERON:0001893telencephalon
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000031Pharyngula:Prim-25
1.30e4
  • 1.30e4
  • 1.32e4
  • 1.40e4
56.21790
  • 56.21790
  • 55.23779
  • 52.60453
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001894diencephalon
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000031Pharyngula:Prim-25
1.30e4
  • 1.30e4
  • 1.32e4
  • 1.35e4
56.21790
  • 56.21790
  • 55.53188
  • 54.51503
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002028hindbrain
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
1.33e4
  • 1.33e4
  • 1.41e4
54.97294
  • 54.97294
  • 52.47126
AEIR
  • AEIR
  • AEIR
UBERON:0007135neural keel
  • ZFS:0000022Gastrula:Bud
1.35e4
  • 1.35e4
54.53193
  • 54.53193
AEIR
  • AEIR
UBERON:0003075neural plate
  • ZFS:0000020Gastrula:75%-epiboly
1.37e4
  • 1.37e4
53.82925
  • 53.82925
AEIR
  • AEIR
UBERON:0001943midbrain tegmentum
  • ZFS:0000033Hatching:Long-pec
1.39e4
  • 1.39e4
53.10304
  • 53.10304
AEIR
  • AEIR
UBERON:0001892rhombomere
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
1.48e4
  • 1.48e4
  • 1.48e4
49.98817
  • 49.98817
  • 49.98479
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBC063953, BC097045, EU127825
EnsemblENSDARG00000006125 (csnk1db)
Uniprot/SWISSPROTKC1DB_DANRE, Q6P3K7
ZFINZDB-GENE-040426-2385 (csnk1db)

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