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D. rerio Gene: eomesa - ENSDARG00000006640 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000006640
Nameeomesa
Descriptioneomesodermin homolog a [Source:ZFIN;Acc:ZDB-GENE-001228-1]
OrganismDanio rerio (zebrafish)
Synonym(s)eom, eom-a, eomes, eomes1, tbr2, tbr2a
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
451
  • 451
98.49
  • 98.49
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
491
  • 491
98.36
  • 98.36
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000015Blastula:Dome
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
733
  • 733
  • 3.82e3
  • 3.90e3
  • 5.74e3
  • 7.45e3
97.55
  • 97.55
  • 87.21
  • 86.95
  • 80.77
  • 75.07
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000037Larval:Day 5
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
3.77e3
  • 3.77e3
  • 8.96e3
  • 9.96e3
  • 1.03e4
  • 1.11e4
  • 1.14e4
  • 1.14e4
  • 1.27e4
  • 1.34e4
  • 1.35e4
  • 1.37e4
  • 1.46e4
  • 1.57e4
  • 1.58e4
  • 1.62e4
  • 1.65e4
87.38
  • 87.38
  • 69.99
  • 66.65
  • 65.61
  • 62.86
  • 61.75
  • 61.75
  • 57.56
  • 55.00
  • 54.67
  • 54.21
  • 51.22
  • 47.48
  • 47.05
  • 45.63
  • 44.66
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
4.01e3
  • 4.01e3
  • 1.34e4
86.58
  • 86.58
  • 55.09
AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
4.19e3
  • 4.19e3
85.96
  • 85.96
AEIR
  • AEIR
UBERON:0000203pallium
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000036Larval:Day 4
  • ZFS:0000029Pharyngula:Prim-5
4.98e3
  • 4.98e3
  • 9.96e3
  • 1.49e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
83.34
  • 83.34
  • 66.67
  • 50.00
  • 50.00
  • 50.00
  • 49.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
5.75e3
  • 5.75e3
80.75
  • 80.75
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.31e3
  • 6.31e3
78.87
  • 78.87
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • UBERON:00072334 cell stage
  • UBERON:0000106zygote stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000015Blastula:Dome
6.40e3
  • 6.40e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.97e3
  • 9.96e3
  • 1.08e4
  • 1.20e4
  • 1.49e4
78.57
  • 78.57
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 73.32
  • 66.66
  • 63.87
  • 59.98
  • 49.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
6.57e3
  • 6.57e3
77.99
  • 77.99
AEIR
  • AEIR
UBERON:0001893telencephalon
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000028Segmentation:26+ somites
7.08e3
  • 7.08e3
  • 7.47e3
  • 7.86e3
  • 1.06e4
  • 1.08e4
  • 1.10e4
  • 1.12e4
  • 1.18e4
  • 1.24e4
  • 1.25e4
76.30
  • 76.30
  • 75.00
  • 73.67
  • 64.56
  • 63.87
  • 63.14
  • 62.48
  • 60.50
  • 58.33
  • 58.31
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004749blastodisc
  • ZFS:0000012Blastula:High
  • UBERON:00072322 cell stage
  • ZFS:0000007Cleavage:64-cell
  • UBERON:0000106zygote stage
  • ZFS:0000014Blastula:Sphere
7.47e3
  • 7.47e3
  • 1.49e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
75.00
  • 75.00
  • 50.00
  • 50.00
  • 50.00
  • 49.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0014912thalamic eminence
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
7.47e3
  • 7.47e3
  • 9.96e3
75.00
  • 75.00
  • 66.67
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
8.21e3
  • 8.21e3
  • 1.05e4
  • 1.29e4
  • 1.41e4
72.50
  • 72.50
  • 64.71
  • 56.89
  • 52.89
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
8.25e3
  • 8.25e3
  • 1.07e4
  • 1.08e4
72.39
  • 72.39
  • 64.28
  • 63.68
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.41e3
  • 8.41e3
71.83
  • 71.83
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
8.78e3
  • 8.78e3
70.61
  • 70.61
AEIR
  • AEIR
UBERON:0001894diencephalon
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000037Larval:Day 5
8.83e3
  • 8.83e3
  • 9.96e3
  • 9.96e3
  • 1.04e4
  • 1.14e4
  • 1.18e4
  • 1.23e4
  • 1.26e4
  • 1.28e4
70.44
  • 70.44
  • 66.67
  • 66.65
  • 65.19
  • 61.75
  • 60.39
  • 58.67
  • 57.87
  • 57.14
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
8.86e3
  • 8.86e3
  • 8.95e3
  • 9.54e3
  • 1.09e4
  • 1.12e4
  • 1.25e4
  • 1.48e4
  • 1.57e4
  • 1.65e4
  • 1.75e4
70.32
  • 70.32
  • 70.04
  • 68.05
  • 63.66
  • 62.43
  • 58.30
  • 50.54
  • 47.37
  • 44.63
  • 41.29
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
9.08e3
  • 9.08e3
  • 1.37e4
69.59
  • 69.59
  • 54.06
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
9.21e3
  • 9.21e3
69.15
  • 69.15
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.37
  • 65.37
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
1.04e4
  • 1.04e4
  • 1.05e4
  • 1.09e4
  • 1.12e4
  • 1.35e4
  • 1.39e4
65.19
  • 65.19
  • 64.98
  • 63.66
  • 62.50
  • 54.72
  • 53.32
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001900ventral thalamus
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
1.07e4
  • 1.07e4
  • 1.49e4
64.28
  • 64.28
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
1.12e4
  • 1.12e4
  • 1.12e4
62.50
  • 62.50
  • 62.49
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.99
  • 59.99
AEIR
  • AEIR
UBERON:0004128optic vesicle
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
1.23e4
  • 1.23e4
  • 1.23e4
  • 1.23e4
58.80
  • 58.80
  • 58.80
  • 58.80
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
1.29e4
  • 1.29e4
  • 1.37e4
56.65
  • 56.65
  • 54.15
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.89
  • 55.89
AEIR
  • AEIR
UBERON:2007026forebrain neural keel
  • ZFS:0000023Segmentation:1-4 somites
1.39e4
  • 1.39e4
53.55
  • 53.55
AEIR
  • AEIR
ZFA:0000541marginal blastomere (Danio)
  • ZFS:0000012Blastula:High
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0000204ventral part of telencephalon
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000036Larval:Day 4
1.49e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001891midbrain
  • ZFS:0000036Larval:Day 4
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0001928preoptic area
  • ZFS:0000029Pharyngula:Prim-5
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:2007034forebrain neural rod
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
1.49e4
  • 1.49e4
  • 1.49e4
49.99
  • 49.99
  • 49.99
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.55e4
  • 1.55e4
48.25
  • 48.25
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
46.68
  • 46.68
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.95e4
  • 1.95e4
34.62
  • 34.62
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.00e4
  • 2.00e4
32.90
  • 32.90
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Cross-references

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