D. rerio Gene: celf3b - ENSDARG00000006983 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000006983
Namecelf3b
Descriptioncugbp, Elav-like family member 3b [Source:ZFIN;Acc:ZDB-GENE-110408-50]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-167h2.2
Orthologs(s)17 orthologs
Paralog(s)439 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
2.53e3
  • 2.53e3
  • 1.25e4
91.54
  • 91.54
  • 58.17
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
3.00e3
  • 3.00e3
89.97
  • 89.97
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
3.68e3
  • 3.68e3
  • 4.24e3
  • 7.41e3
  • 8.82e3
  • 1.01e4
87.67
  • 87.67
  • 85.81
  • 75.18
  • 70.46
  • 66.33
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
4.18e3
  • 4.18e3
86.01
  • 86.01
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
4.50e3
  • 4.50e3
84.92
  • 84.92
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
5.51e3
  • 5.51e3
  • 8.24e3
81.55
  • 81.55
  • 72.42
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
9.53e3
  • 9.53e3
68.09
  • 68.09
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.14e4
  • 1.14e4
61.94
  • 61.94
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
1.32e4
  • 1.32e4
  • 1.44e4
55.75
  • 55.75
  • 51.70
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.40e4
  • 1.40e4
  • 1.44e4
53.17
  • 53.17
  • 51.71
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.44e4
  • 1.44e4
51.89
  • 51.89
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.45e4
  • 1.45e4
51.34
  • 51.34
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.45e4
  • 1.45e4
51.31
  • 51.31
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.57e4
  • 1.57e4
47.50
  • 47.50
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.61e4
  • 1.61e4
46.10
  • 46.10
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.66e4
  • 1.66e4
44.51
  • 44.51
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.68e4
  • 1.68e4
43.81
  • 43.81
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.78e4
  • 1.78e4
40.24
  • 40.24
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.79e4
  • 1.79e4
40.05
  • 40.05
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.92e4
  • 1.92e4
35.80
  • 35.80
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.08e4
  • 2.08e4
30.38
  • 30.38
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata3 genesCompare expression
Bilateria4 genesCompare expression
Opisthokonta6 genesCompare expression
Eukaryota439 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000006983.

Cross-references

EnsemblENSDARG00000006983 (celf3b)
ZFINZDB-GENE-110408-50 (celf3b)
Uniprot/SPTREMBLE7F293, E7F293_DANRE, F8W3M7, F8W3M7_DANRE

Do not show this banner again