Gene: slc26a3.1 - ENSDARG00000007371 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000007371
Name	slc26a3.1
Description	solute carrier family 26 (anion exchanger), member 3 [Source:ZFIN;Acc:ZDB-GENE-041210-180]
Organism	Danio rerio (zebrafish)
Synonym(s)	si:dkey-31f5.2, si:dkey-31f5.2,gn slc26a3 {eco:0000313\|ensembl:ensdarp00000040423,gn eco:0000313\|zfin:zdb-gene-0, slc26a3
Orthologs(s)	19 orthologs
Paralog(s)	9 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	1.37e4 1.37e4	54.09 54.09	AEIR AEIR
UBERON:0000080	mesonephros	[+] 1 stage ZFS:0000039Larval:Days 7-13	1.49e4 1.49e4	50.00 50.00	AEIR AEIR
UBERON:0000948	heart	[+] 1 stage ZFS:0000039Larval:Days 7-13	1.49e4 1.49e4	50.00 50.00	AEIR AEIR
UBERON:0008904	neuromast	[+] 1 stage ZFS:0000039Larval:Days 7-13	1.49e4 1.49e4	50.00 50.00	AEIR AEIR
UBERON:0011150	pharyngeal arch derived gill	[+] 1 stage ZFS:0000039Larval:Days 7-13	1.49e4 1.49e4	50.00 50.00	AEIR AEIR
UBERON:0004734	gastrula	[+] 1 stage ZFS:0000022Gastrula:Bud	1.80e4 1.80e4	39.84 39.84	AEIR AEIR
UBERON:0000922	embryo	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000068embryo stage	2.21e4 2.21e4 2.77e4	25.90 25.90 7.41	AEIR AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

In situ hybridization data: ZFIN
RNA-Seq data: Bgee

Sources of raw data:

In situ hybridization data: ZFIN
RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Euteleostomi	19 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Monodelphis domestica (opossum) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken) Anolis carolinensis (green anole) Xenopus tropicalis (western clawed frog)	19 genes ENSG00000091138 SLC26A3 ENSMUSG00000001225 Slc26a3 ENSPTRG00000022537 SLC26A3 ENSGGOG00000006523 SLC26A3 ENSMMUG00000017618 SLC26A3 ENSRNOG00000006878 Slc26a3 ENSBTAG00000015547 SLC26A3 ENSSSCG00000021813 ENSECAG00000015404 SLC26A3 ENSOCUG00000001129 SLC26A3 ENSCAFG00000003853 SLC26A3 ENSFCAG00000004476 SLC26A3 ENSCPOG00000014568 Slc26a3 ENSEEUG00000004661 SLC26A3 ENSMODG00000016330 SLC26A3 ENSOANG00000003182 ENSGALG00000007959 SLC26A3 ENSACAG00000015236 SLC26A3 ENSXETG00000012233 slc26a3.1	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000007371.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Euteleostomi	1 gene ENSDARG00000003615 slc26a3.2	Compare expression	[+]
Opisthokonta	8 genes ENSDARG00000003615 slc26a3.2 ENSDARG00000011618 slc26a2 ENSDARG00000022424 slc26a5 ENSDARG00000029832 slc26a1 ENSDARG00000055835 slc26a6 ENSDARG00000058738 SLC26A6 (1 to many) ENSDARG00000069431 slc26a4 ENSDARG00000097292 slc26a6	Compare expression	[+]
Eukaryota	9 genes ENSDARG00000003615 slc26a3.2 ENSDARG00000011618 slc26a2 ENSDARG00000022424 slc26a5 ENSDARG00000029832 slc26a1 ENSDARG00000043021 slc26a11 ENSDARG00000055835 slc26a6 ENSDARG00000058738 SLC26A6 (1 to many) ENSDARG00000069431 slc26a4 ENSDARG00000097292 slc26a6	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000007371.

Cross-references

Ensembl	ENSDARG00000007371 (slc26a3.1)
ZFIN	ZDB-GENE-041210-180 (slc26a3.1)
EMBL	BX649534, FJ170816
Uniprot/SPTREMBL	B6DUH7, B6DUH7_DANRE, Q5RGV3, Q5RGV3_DANRE