D. rerio Gene: myl9b - ENSDARG00000008030 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000008030
Namemyl9b
Descriptionmyosin, light chain 9b, regulatory [Source:ZFIN;Acc:ZDB-GENE-040426-2296]
OrganismDanio rerio (zebrafish)
Synonym(s)myl9, myl9l, myl9lgn, zgc:77916
Orthologs(s)19 orthologs
Paralog(s)49 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
110
  • 110
99.63
  • 99.63
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
235
  • 235
  • 358
99.22
  • 99.22
  • 98.80
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
338
  • 338
98.87
  • 98.87
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
639
  • 639
97.86
  • 97.86
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
798
  • 798
  • 1.67e3
97.33
  • 97.33
  • 94.42
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
859
  • 859
  • 1.22e3
  • 1.38e3
  • 3.49e3
  • 3.52e3
97.13
  • 97.13
  • 95.93
  • 95.38
  • 88.33
  • 88.21
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.05e3
  • 1.05e3
96.48
  • 96.48
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.22e3
  • 1.22e3
95.91
  • 95.91
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.32e3
  • 1.32e3
95.58
  • 95.58
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.34e3
  • 1.34e3
  • 6.21e3
95.51
  • 95.51
  • 79.22
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.38e3
  • 1.38e3
95.38
  • 95.38
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.39e3
  • 2.39e3
92.01
  • 92.01
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.61e3
  • 2.61e3
91.28
  • 91.28
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.63e3
  • 2.63e3
91.20
  • 91.20
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
3.22e3
  • 3.22e3
89.23
  • 89.23
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
3.30e3
  • 3.30e3
  • 9.53e3
88.94
  • 88.94
  • 68.08
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
5.14e3
  • 5.14e3
82.81
  • 82.81
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
8.01e3
  • 8.01e3
73.17
  • 73.17
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
8.02e3
  • 8.02e3
73.16
  • 73.16
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
9.37e3
  • 9.37e3
68.64
  • 68.64
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.02e4
  • 1.02e4
65.91
  • 65.91
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.55
  • 65.55
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
1.17e4
  • 1.17e4
  • 1.27e4
60.72
  • 60.72
  • 57.64
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.18e4
  • 1.18e4
60.41
  • 60.41
AEIR
  • AEIR
CL:0000192smooth muscle cell
  • ZFS:0000033Hatching:Long-pec
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi10 species10 genesCompare expression
Bilateria17 species19 genesCompare expression

Orthology information comes from OMA : ENSDARG00000008030.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi1 geneCompare expression
Chordata3 genesCompare expression
Bilateria4 genesCompare expression
Opisthokonta5 genesCompare expression
Eukaryota49 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000008030.

Cross-references

EnsemblENSDARG00000008030 (myl9b)
ZFINZDB-GENE-040426-2296 (myl9b)
EMBLBC068220, CABZ01084922
Uniprot/SPTREMBLQ6NVA6, Q6NVA6_DANRE

Do not show this banner again