D. rerio Gene: hdac6 - ENSDARG00000008384 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000008384
Namehdac6
Descriptionhistone deacetylase 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3232]
OrganismDanio rerio (zebrafish)
Synonym(s)wu:fc31d02

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
4.80e3
  • 4.80e3
83.94488
  • 83.94488
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.64e3
  • 5.64e3
81.10280
  • 81.10280
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
5.96e3
  • 5.96e3
  • 7.00e3
  • 9.48e3
  • 1.10e4
80.03118
  • 80.03118
  • 76.55051
  • 68.24542
  • 63.27921
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
6.00e3
  • 6.00e3
79.89820
  • 79.89820
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
6.09e3
  • 6.09e3
  • 6.66e3
  • 6.66e3
  • 6.89e3
  • 7.28e3
  • 7.45e3
  • 7.64e3
  • 9.71e3
  • 9.84e3
  • 1.14e4
79.60041
  • 79.60041
  • 77.69759
  • 77.68627
  • 76.91853
  • 75.63761
  • 75.04789
  • 74.43325
  • 67.48297
  • 67.06567
  • 61.91987
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
6.09e3
  • 6.09e3
  • 8.65e3
79.59706
  • 79.59706
  • 71.03663
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
6.21e3
  • 6.21e3
79.21291
  • 79.21291
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
6.79e3
  • 6.79e3
77.28162
  • 77.28162
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
7.02e3
  • 7.02e3
  • 8.11e3
76.48937
  • 76.48937
  • 72.86103
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
7.27e3
  • 7.27e3
  • 1.02e4
  • 1.04e4
  • 1.05e4
  • 1.40e4
  • 1.42e4
75.66574
  • 75.66574
  • 66.00134
  • 65.25148
  • 64.75585
  • 53.25262
  • 52.49121
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
7.29e3
  • 7.29e3
75.60111
  • 75.60111
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.30e3
  • 7.30e3
75.55400
  • 75.55400
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
7.46e3
  • 7.46e3
75.01591
  • 75.01591
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
7.53e3
  • 7.53e3
74.77206
  • 74.77206
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.36e3
  • 8.36e3
71.99568
  • 71.99568
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
8.37e3
  • 8.37e3
71.96531
  • 71.96531
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
8.52e3
  • 8.52e3
71.47306
  • 71.47306
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
8.72e3
  • 8.72e3
70.81338
  • 70.81338
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
9.13e3
  • 9.13e3
69.42846
  • 69.42846
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
9.62e3
  • 9.62e3
  • 1.21e4
  • 1.32e4
67.79855
  • 67.79855
  • 59.42695
  • 55.92824
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
9.96e3
  • 9.96e3
  • 1.05e4
66.66765
  • 66.66765
  • 64.96805
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.03e4
  • 1.03e4
  • 1.08e4
65.52255
  • 65.52255
  • 63.98232
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.83943
  • 64.83943
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.83819
  • 63.83819
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.14e4
  • 1.14e4
61.98453
  • 61.98453
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.16e4
  • 1.16e4
61.17379
  • 61.17379
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.22e4
  • 1.22e4
  • 1.22e4
  • 1.23e4
  • 1.46e4
  • 1.62e4
59.14011
  • 59.14011
  • 59.07263
  • 58.71751
  • 51.27566
  • 45.66822
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
1.29e4
  • 1.29e4
  • 1.32e4
  • 1.32e4
  • 1.32e4
  • 1.35e4
  • 1.36e4
  • 1.38e4
  • 1.39e4
  • 1.41e4
  • 1.45e4
  • 1.49e4
  • 1.51e4
  • 1.52e4
  • 1.52e4
56.89680
  • 56.89680
  • 55.87215
  • 55.84891
  • 55.68429
  • 54.69189
  • 54.61059
  • 53.89067
  • 53.58701
  • 52.63426
  • 51.48421
  • 50.03091
  • 49.39212
  • 49.21565
  • 49.14439
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

Do not show this banner again