D. rerio Gene: guca1a - ENSDARG00000010454 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000010454
Nameguca1a
Descriptionguanylate cyclase activator 1A [Source:ZFIN;Acc:ZDB-GENE-011128-5]
OrganismDanio rerio (zebrafish)
Synonym(s)gcap1
Orthologs(s)3 orthologs
Paralog(s)49 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
2.02e3
  • 2.02e3
  • 6.52e3
93.23
  • 93.23
  • 78.15
AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000035Larval:Protruding-mouth
8.96e3
  • 8.96e3
69.99
  • 69.99
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
1.44e4
  • 1.44e4
  • 1.57e4
  • 1.77e4
  • 1.78e4
  • 1.78e4
  • 1.79e4
  • 1.83e4
51.95
  • 51.95
  • 47.38
  • 40.62
  • 40.43
  • 40.38
  • 40.18
  • 38.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
1.54e4
  • 1.54e4
  • 1.57e4
  • 1.68e4
  • 1.69e4
  • 1.75e4
48.57
  • 48.57
  • 47.50
  • 43.69
  • 43.58
  • 41.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.65e4
  • 1.65e4
44.73
  • 44.73
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
1.78e4
  • 1.78e4
  • 2.08e4
  • 2.12e4
  • 2.27e4
  • 2.39e4
40.40
  • 40.40
  • 30.42
  • 29.05
  • 23.92
  • 19.91
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
2.01e4
  • 2.01e4
  • 2.14e4
32.80
  • 32.80
  • 28.27
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.03e4
  • 2.03e4
32.18
  • 32.18
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Orthology information comes from OMA : ENSDARG00000010454.

Paralogs (same species)

Cross-references

EnsemblENSDARG00000010454 (guca1a)
ZFINZDB-GENE-011128-5 (guca1a)
EMBLBX537162
Uniprot/SPTREMBLQ1LWS5, Q1LWS5_DANRE

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