D. rerio Gene: zdhhc3a - ENSDARG00000010981 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000010981
Namezdhhc3a
Descriptionzinc finger, DHHC-type containing 3a [Source:ZFIN;Acc:ZDB-GENE-040718-484]
OrganismDanio rerio (zebrafish)
Synonym(s)ik:tdsubc_2d6, tdsubc_2d6, xx:tdsubc_2d6, zdhhc3, zgc:92587
Orthologs(s)19 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
3.70e3
  • 3.70e3
87.63
  • 87.63
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
4.77e3
  • 4.77e3
  • 8.27e3
  • 1.19e4
  • 1.21e4
  • 1.25e4
  • 1.26e4
84.03
  • 84.03
  • 72.31
  • 60.32
  • 59.34
  • 58.27
  • 57.66
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
4.95e3
  • 4.95e3
  • 6.50e3
  • 8.09e3
  • 9.00e3
  • 9.30e3
83.43
  • 83.43
  • 78.23
  • 72.91
  • 69.85
  • 68.85
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000028Segmentation:26+ somites
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
4.98e3
  • 4.98e3
  • 5.93e3
  • 6.19e3
  • 6.54e3
  • 6.64e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.97e3
  • 7.03e3
  • 7.47e3
  • 7.47e3
  • 7.91e3
  • 8.96e3
  • 8.96e3
  • 1.06e4
  • 1.12e4
  • 1.15e4
  • 1.18e4
  • 1.23e4
  • 1.31e4
  • 1.34e4
  • 1.36e4
  • 1.37e4
  • 1.37e4
  • 1.39e4
  • 1.39e4
  • 1.45e4
  • 1.49e4
83.33
  • 83.33
  • 80.14
  • 79.26
  • 78.12
  • 77.77
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 76.66
  • 76.46
  • 74.99
  • 74.99
  • 73.52
  • 69.99
  • 69.99
  • 64.63
  • 62.37
  • 61.58
  • 60.49
  • 58.70
  • 55.99
  • 55.18
  • 54.58
  • 54.19
  • 54.01
  • 53.56
  • 53.48
  • 51.42
  • 50.25
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
5.33e3
  • 5.33e3
82.17
  • 82.17
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.35e3
  • 5.35e3
82.09
  • 82.09
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
7.76e3
  • 7.76e3
  • 1.12e4
74.03
  • 74.03
  • 62.55
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.60e3
  • 8.60e3
71.21
  • 71.21
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
9.02e3
  • 9.02e3
69.79
  • 69.79
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
9.74e3
  • 9.74e3
  • 1.79e4
67.38
  • 67.38
  • 39.93
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.74e3
  • 9.74e3
67.38
  • 67.38
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
9.90e3
  • 9.90e3
66.87
  • 66.87
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.12
  • 65.12
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.58
  • 64.58
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.10
  • 63.10
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.12e4
  • 1.12e4
62.49
  • 62.49
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
61.84
  • 61.84
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.15e4
  • 1.15e4
61.35
  • 61.35
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.29
  • 61.29
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000025Segmentation:10-13 somites
1.18e4
  • 1.18e4
  • 1.19e4
  • 1.26e4
  • 1.28e4
  • 1.34e4
  • 1.62e4
  • 1.68e4
  • 1.75e4
  • 1.78e4
  • 1.78e4
60.38
  • 60.38
  • 60.15
  • 57.65
  • 57.29
  • 55.02
  • 45.68
  • 43.79
  • 41.29
  • 40.54
  • 40.40
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.13
  • 60.13
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.19e4
  • 1.19e4
  • 1.27e4
60.06
  • 60.06
  • 57.32
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.92
  • 59.92
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.22e4
  • 1.22e4
  • 1.24e4
59.28
  • 59.28
  • 58.64
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.90
  • 58.90
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.31e4
  • 1.31e4
  • 1.52e4
  • 1.75e4
56.10
  • 56.10
  • 49.11
  • 41.43
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
56.02
  • 56.02
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.37e4
  • 1.37e4
54.00
  • 54.00
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.42e4
  • 1.42e4
52.40
  • 52.40
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Vertebrata2 genesCompare expression
Opisthokonta3 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000010981.

Cross-references

EnsemblENSDARG00000010981 (zdhhc3a)
ZFINZDB-GENE-040718-484 (zdhhc3a)
EMBLCR925805
Uniprot/SPTREMBLF1RE57, F1RE57_DANRE

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