D. rerio Gene: zgc:92907 - ENSDARG00000011026 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000011026
Namezgc:92907
Descriptionzgc:92907 [Source:ZFIN;Acc:ZDB-GENE-040718-161]
OrganismDanio rerio (zebrafish)
Orthologs(s)24 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
3.33e3
  • 3.33e3
88.86
  • 88.86
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.34e3
  • 4.34e3
85.47
  • 85.47
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
5.11e3
  • 5.11e3
82.88
  • 82.88
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
5.20e3
  • 5.20e3
  • 5.27e3
  • 5.84e3
  • 6.03e3
  • 8.05e3
  • 8.08e3
  • 8.43e3
  • 9.43e3
  • 1.22e4
  • 1.38e4
82.59
  • 82.59
  • 82.36
  • 80.45
  • 79.80
  • 73.04
  • 72.96
  • 71.76
  • 68.43
  • 59.27
  • 53.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
6.60e3
  • 6.60e3
77.89
  • 77.89
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
6.64e3
  • 6.64e3
77.78
  • 77.78
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.93e3
  • 6.93e3
76.81
  • 76.81
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
6.97e3
  • 6.97e3
76.68
  • 76.68
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
7.29e3
  • 7.29e3
75.60
  • 75.60
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
7.39e3
  • 7.39e3
  • 1.03e4
75.24
  • 75.24
  • 65.67
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
7.42e3
  • 7.42e3
  • 9.41e3
  • 1.06e4
  • 1.09e4
75.16
  • 75.16
  • 68.51
  • 64.65
  • 63.52
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
7.50e3
  • 7.50e3
  • 1.42e4
74.90
  • 74.90
  • 52.56
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
7.71e3
  • 7.71e3
  • 7.98e3
  • 9.27e3
  • 1.05e4
  • 1.05e4
  • 1.05e4
74.20
  • 74.20
  • 73.27
  • 68.96
  • 64.95
  • 64.84
  • 64.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
8.04e3
  • 8.04e3
73.10
  • 73.10
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
8.41e3
  • 8.41e3
71.83
  • 71.83
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.45e3
  • 8.45e3
71.72
  • 71.72
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
8.46e3
  • 8.46e3
71.69
  • 71.69
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
8.51e3
  • 8.51e3
  • 9.71e3
  • 1.18e4
71.49
  • 71.49
  • 67.49
  • 60.53
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
8.59e3
  • 8.59e3
71.25
  • 71.25
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
8.75e3
  • 8.75e3
70.69
  • 70.69
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
8.76e3
  • 8.76e3
70.68
  • 70.68
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
8.94e3
  • 8.94e3
  • 1.01e4
70.06
  • 70.06
  • 66.08
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000106zygote stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000037Larval:Day 5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
8.96e3
  • 8.96e3
  • 8.97e3
  • 9.23e3
  • 9.34e3
  • 9.66e3
  • 9.92e3
  • 9.96e3
  • 1.02e4
  • 1.02e4
  • 1.03e4
  • 1.05e4
  • 1.08e4
  • 1.16e4
  • 1.28e4
  • 1.32e4
  • 1.32e4
  • 1.35e4
69.99
  • 69.99
  • 69.95
  • 69.09
  • 68.74
  • 67.65
  • 66.77
  • 66.66
  • 66.00
  • 65.98
  • 65.54
  • 64.69
  • 63.75
  • 61.27
  • 56.99
  • 55.90
  • 55.86
  • 54.83
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
9.23e3
  • 9.23e3
  • 9.57e3
69.09
  • 69.09
  • 67.95
AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
9.57e3
  • 9.57e3
67.94
  • 67.94
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000015Blastula:Dome
9.71e3
  • 9.71e3
  • 1.08e4
  • 1.15e4
  • 1.15e4
  • 1.15e4
67.48
  • 67.48
  • 63.89
  • 61.66
  • 61.37
  • 61.36
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
9.71e3
  • 9.71e3
67.48
  • 67.48
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
9.72e3
  • 9.72e3
67.46
  • 67.46
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.04
  • 66.04
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.53
  • 65.53
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.63
  • 64.63
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.06e4
  • 1.06e4
64.50
  • 64.50
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.14
  • 63.14
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.24e4
  • 1.24e4
58.58
  • 58.58
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi15 species17 genesCompare expression
Bilateria22 species24 genesCompare expression

Orthology information comes from OMA : ENSDARG00000011026.

Cross-references

EnsemblENSDARG00000011026 (zgc:92907)
ZFINZDB-GENE-040718-161 (zgc:92907)
EMBLBX530080
Uniprot/SPTREMBLF1R0S3, F1R0S3_DANRE

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