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D. rerio Gene: fbxo9 - ENSDARG00000011055 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000011055
Namefbxo9
DescriptionF-box protein 9 [Source:ZFIN;Acc:ZDB-GENE-030131-4194]
OrganismDanio rerio (zebrafish)
Synonym(s)q6dg26, wu:fc79g12, zgc:56212, zgc:77654
Orthologs(s)25 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
919
  • 919
96.93
  • 96.93
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.07e3
  • 1.07e3
96.41
  • 96.41
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
1.11e3
  • 1.11e3
  • 5.23e3
  • 5.28e3
  • 5.59e3
96.29
  • 96.29
  • 82.49
  • 82.32
  • 81.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.18e3
  • 1.18e3
96.06
  • 96.06
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.45e3
  • 1.45e3
95.15
  • 95.15
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.50e3
  • 1.50e3
  • 1.80e3
94.99
  • 94.99
  • 93.97
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.52e3
  • 1.52e3
94.92
  • 94.92
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.56e3
  • 1.56e3
94.79
  • 94.79
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.81e3
  • 1.81e3
93.94
  • 93.94
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.82e3
  • 1.82e3
93.91
  • 93.91
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.00e3
  • 2.00e3
93.32
  • 93.32
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.00e3
  • 2.00e3
93.31
  • 93.31
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
2.06e3
  • 2.06e3
  • 8.29e3
93.10
  • 93.10
  • 72.24
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
2.10e3
  • 2.10e3
  • 4.11e3
  • 4.61e3
  • 4.90e3
  • 5.01e3
  • 5.67e3
  • 6.92e3
  • 6.99e3
  • 8.04e3
  • 8.76e3
92.96
  • 92.96
  • 86.24
  • 84.56
  • 83.59
  • 83.23
  • 81.01
  • 76.84
  • 76.59
  • 73.10
  • 70.67
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.15e3
  • 2.15e3
92.80
  • 92.80
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
2.33e3
  • 2.33e3
92.21
  • 92.21
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
2.58e3
  • 2.58e3
91.35
  • 91.35
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
2.79e3
  • 2.79e3
  • 2.87e3
90.66
  • 90.66
  • 90.39
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
3.01e3
  • 3.01e3
  • 4.24e3
  • 5.57e3
89.94
  • 89.94
  • 85.81
  • 81.34
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000106zygote stage
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
3.92e3
  • 3.92e3
  • 4.63e3
  • 5.05e3
  • 5.81e3
  • 7.21e3
  • 7.23e3
  • 7.59e3
  • 7.65e3
  • 7.73e3
  • 7.89e3
  • 7.95e3
  • 7.99e3
  • 8.07e3
  • 1.15e4
  • 1.38e4
  • 1.48e4
86.87
  • 86.87
  • 84.51
  • 83.08
  • 80.56
  • 75.85
  • 75.79
  • 74.59
  • 74.40
  • 74.13
  • 73.60
  • 73.37
  • 73.25
  • 72.98
  • 61.62
  • 53.74
  • 50.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
4.23e3
  • 4.23e3
  • 4.43e3
  • 5.89e3
  • 7.00e3
  • 7.02e3
  • 9.08e3
85.85
  • 85.85
  • 85.18
  • 80.28
  • 76.57
  • 76.50
  • 69.59
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
4.59e3
  • 4.59e3
  • 5.61e3
  • 6.30e3
  • 7.55e3
  • 7.67e3
84.64
  • 84.64
  • 81.22
  • 78.89
  • 74.71
  • 74.33
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
5.25e3
  • 5.25e3
82.42
  • 82.42
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
5.29e3
  • 5.29e3
  • 8.88e3
82.29
  • 82.29
  • 70.28
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
6.06e3
  • 6.06e3
79.72
  • 79.72
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
6.73e3
  • 6.73e3
77.47
  • 77.47
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
7.03e3
  • 7.03e3
  • 7.47e3
  • 8.22e3
  • 1.14e4
  • 1.20e4
  • 1.23e4
  • 1.25e4
  • 1.25e4
76.46
  • 76.46
  • 74.99
  • 72.48
  • 61.88
  • 59.98
  • 58.80
  • 58.31
  • 58.31
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.63e3
  • 7.63e3
74.47
  • 74.47
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
8.11e3
  • 8.11e3
72.85
  • 72.85
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
9.13e3
  • 9.13e3
69.42
  • 69.42
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
9.96e3
  • 9.96e3
  • 1.07e4
  • 1.09e4
  • 1.12e4
  • 1.42e4
66.65
  • 66.65
  • 64.27
  • 63.63
  • 62.49
  • 52.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001945superior colliculus
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.02e4
  • 1.02e4
  • 1.05e4
  • 1.21e4
  • 1.25e4
  • 1.25e4
  • 1.26e4
  • 1.26e4
65.77
  • 65.77
  • 64.69
  • 59.50
  • 58.31
  • 58.31
  • 57.87
  • 57.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007269pectoral appendage musculature
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
1.02e4
  • 1.02e4
  • 1.02e4
65.77
  • 65.77
  • 65.77
AEIR
  • AEIR
  • AEIR
UBERON:0003082myotome
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.05e4
  • 1.05e4
  • 1.16e4
  • 1.18e4
  • 1.20e4
  • 1.25e4
  • 1.25e4
64.99
  • 64.99
  • 61.09
  • 60.50
  • 59.98
  • 58.31
  • 58.31
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003060pronephric duct
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
1.12e4
  • 1.12e4
  • 1.12e4
  • 1.20e4
  • 1.20e4
  • 1.26e4
62.48
  • 62.48
  • 62.48
  • 59.98
  • 59.98
  • 57.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.18e4
  • 1.18e4
60.65
  • 60.65
AEIR
  • AEIR
UBERON:0010312immature eye
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
1.18e4
  • 1.18e4
  • 1.21e4
  • 1.23e4
60.50
  • 60.50
  • 59.50
  • 58.80
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2001357alar plate midbrain
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
1.20e4
  • 1.20e4
  • 1.26e4
  • 1.26e4
59.98
  • 59.98
  • 57.87
  • 57.87
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi19 species19 genesCompare expression
Bilateria25 species25 genesCompare expression

Orthology information comes from OMA : ENSDARG00000011055.

Cross-references

EnsemblENSDARG00000011055 (fbxo9)
ZFINZDB-GENE-030131-4194 (fbxo9)
EMBLBC063957, BC076528, CR376766
Uniprot/SPTREMBLF1QAK0, F1QAK0_DANRE
Uniprot/SWISSPROTFBX9_DANRE, Q6P3K3

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