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D. rerio Gene: camk2b1 - ENSDARG00000011065 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000011065
Namecamk2b1
Descriptioncalcium/calmodulin-dependent protein kinase (CaM kinase) II beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9588]
OrganismDanio rerio (zebrafish)
Synonym(s)camk2b, camk2gb, fj90d04, si:dkey-174n20.2, wu:fj90d04, zgc:165373
Orthologs(s)18 orthologs
Paralog(s)5 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
598
  • 598
  • 8.09e3
98.00
  • 98.00
  • 72.93
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000023Segmentation:1-4 somites
  • UBERON:00072368 cell stage
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000015Blastula:Dome
  • UBERON:0000106zygote stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
859
  • 859
  • 1.80e3
  • 1.84e3
  • 1.90e3
  • 4.30e3
  • 5.05e3
  • 5.34e3
  • 6.64e3
  • 6.79e3
  • 6.79e3
  • 7.47e3
  • 1.01e4
  • 1.15e4
  • 1.35e4
  • 1.37e4
  • 1.47e4
97.13
  • 97.13
  • 93.96
  • 93.85
  • 93.65
  • 85.61
  • 83.11
  • 82.11
  • 77.77
  • 77.27
  • 77.27
  • 74.99
  • 66.05
  • 61.47
  • 54.87
  • 54.29
  • 50.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
898
  • 898
97.00
  • 97.00
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.00e3
  • 1.00e3
96.64
  • 96.64
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.08e3
  • 1.08e3
96.38
  • 96.38
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000035Larval:Protruding-mouth
1.38e3
  • 1.38e3
  • 3.31e3
  • 4.56e3
  • 9.76e3
  • 1.29e4
95.40
  • 95.40
  • 88.93
  • 84.74
  • 67.33
  • 56.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
1.57e3
  • 1.57e3
  • 3.16e3
  • 3.39e3
  • 5.30e3
  • 5.46e3
  • 6.95e3
  • 8.56e3
  • 1.22e4
  • 1.29e4
  • 1.37e4
94.76
  • 94.76
  • 89.41
  • 88.65
  • 82.25
  • 81.74
  • 76.74
  • 71.34
  • 59.08
  • 56.73
  • 54.16
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.73e3
  • 1.73e3
  • 2.00e3
94.21
  • 94.21
  • 93.29
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.82e3
  • 1.82e3
  • 4.17e3
93.92
  • 93.92
  • 86.03
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
1.93e3
  • 1.93e3
  • 2.08e3
  • 2.89e3
93.55
  • 93.55
  • 93.04
  • 90.32
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
2.16e3
  • 2.16e3
92.76
  • 92.76
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.38e3
  • 2.38e3
92.05
  • 92.05
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
3.04e3
  • 3.04e3
  • 5.78e3
89.81
  • 89.81
  • 80.65
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
4.28e3
  • 4.28e3
85.67
  • 85.67
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
4.96e3
  • 4.96e3
83.40
  • 83.40
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
5.73e3
  • 5.73e3
80.80
  • 80.80
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.90e3
  • 5.90e3
80.23
  • 80.23
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
6.05e3
  • 6.05e3
79.74
  • 79.74
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
6.09e3
  • 6.09e3
79.60
  • 79.60
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.97e3
  • 6.97e3
76.66
  • 76.66
AEIR
  • AEIR
UBERON:0002100trunk
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
7.47e3
  • 7.47e3
  • 9.96e3
75.00
  • 75.00
  • 66.67
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.55e3
  • 7.55e3
74.73
  • 74.73
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
8.31e3
  • 8.31e3
72.19
  • 72.19
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
9.46e3
  • 9.46e3
68.33
  • 68.33
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
9.56e3
  • 9.56e3
67.97
  • 67.97
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
9.58e3
  • 9.58e3
67.92
  • 67.92
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
1.09e4
  • 1.09e4
  • 1.14e4
  • 1.33e4
  • 1.66e4
63.54
  • 63.54
  • 61.79
  • 55.30
  • 44.32
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.10e4
  • 1.10e4
  • 1.18e4
  • 1.63e4
63.23
  • 63.23
  • 60.36
  • 45.58
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001555digestive tract
  • ZFS:0000035Larval:Protruding-mouth
1.12e4
  • 1.12e4
62.49
  • 62.49
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.15e4
  • 1.15e4
61.41
  • 61.41
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
1.19e4
  • 1.19e4
  • 1.37e4
60.04
  • 60.04
  • 54.13
AEIR
  • AEIR
  • AEIR
UBERON:0001891midbrain
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000033Hatching:Long-pec
1.19e4
  • 1.19e4
  • 1.29e4
59.99
  • 59.99
  • 56.65
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.23e4
  • 1.23e4
58.81
  • 58.81
AEIR
  • AEIR
UBERON:0000151pectoral fin
  • ZFS:0000035Larval:Protruding-mouth
1.28e4
  • 1.28e4
57.14
  • 57.14
AEIR
  • AEIR
UBERON:0001890forebrain
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
1.29e4
  • 1.29e4
  • 1.49e4
56.65
  • 56.65
  • 49.99
AEIR
  • AEIR
  • AEIR
UBERON:0002538hatching gland
  • ZFS:0000029Pharyngula:Prim-5
1.38e4
  • 1.38e4
53.83
  • 53.83
AEIR
  • AEIR
UBERON:0002028hindbrain
  • ZFS:0000035Larval:Protruding-mouth
1.39e4
  • 1.39e4
53.55
  • 53.55
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.53e4
  • 1.53e4
48.60
  • 48.60
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi13 species13 genesCompare expression
Bilateria18 species18 genesCompare expression

Orthology information comes from OMA : ENSDARG00000011065.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata5 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000011065.

Cross-references

EnsemblENSDARG00000011065 (camk2b1)
ZFINZDB-GENE-030131-9588 (camk2b1)
EMBLBX511148
Uniprot/SPTREMBLA2BGW3, A2BGW3_DANRE, E9QDQ2, E9QDQ2_DANRE

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