D. rerio Gene: glra3 - ENSDARG00000011066 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000011066
Nameglra3
Descriptionglycine receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-020402-1]
OrganismDanio rerio (zebrafish)
Synonym(s)glyralpha3
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
2.63e3
  • 2.63e3
91.20
  • 91.20
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
7.42e3
  • 7.42e3
  • 1.44e4
75.14
  • 75.14
  • 51.73
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
9.98e3
  • 9.98e3
  • 1.59e4
  • 1.61e4
  • 1.64e4
  • 1.77e4
66.57
  • 66.57
  • 46.92
  • 46.05
  • 45.21
  • 40.74
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
1.20e4
  • 1.20e4
  • 1.50e4
  • 1.56e4
59.79
  • 59.79
  • 49.63
  • 47.74
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.12
  • 59.12
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
1.33e4
  • 1.33e4
  • 1.59e4
  • 1.79e4
  • 1.81e4
55.41
  • 55.41
  • 46.92
  • 40.18
  • 39.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.87e4
  • 1.87e4
37.26
  • 37.26
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata4 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000011066.

Cross-references

EnsemblENSDARG00000011066 (glra3)
ZFINZDB-GENE-020402-1 (glra3)
Uniprot/SPTREMBLF1QCW4, F1QCW4_DANRE

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