D. rerio Gene: si:ch211-288d18.1 - ENSDARG00000011088 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000011088
Namesi:ch211-288d18.1
Descriptionsi:ch211-288d18.1 [Source:ZFIN;Acc:ZDB-GENE-060503-323]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
5.06e3
  • 5.06e3
82.89984
  • 82.89984
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
7.36e3
  • 7.36e3
  • 1.18e4
75.12379
  • 75.12379
  • 60.21438
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
8.76e3
  • 8.76e3
  • 8.89e3
  • 1.24e4
  • 1.37e4
  • 1.60e4
70.40529
  • 70.40529
  • 69.94859
  • 58.25123
  • 53.70862
  • 45.95224
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
9.71e3
  • 9.71e3
67.18541
  • 67.18541
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
58.61964
  • 58.61964
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
54.54008
  • 54.54008
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.04851
  • 53.04851
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.45e4
  • 1.45e4
50.85546
  • 50.85546
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
49.50400
  • 49.50400
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.67e4
  • 1.67e4
43.52830
  • 43.52830
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.74e4
  • 1.74e4
41.12856
  • 41.12856
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.78e4
  • 1.78e4
39.73941
  • 39.73941
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.79e4
  • 1.79e4
39.65491
  • 39.65491
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.84e4
  • 1.84e4
37.86098
  • 37.86098
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.84e4
  • 1.84e4
37.73512
  • 37.73512
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.96e4
  • 1.96e4
33.85159
  • 33.85159
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAL928628, BX001047
EnsemblENSDARG00000011088 (si:ch211-288d18.1)
Uniprot/SPTREMBLQ1LYR2, Q1LYR2_DANRE
ZFINZDB-GENE-060503-323 (si:ch211-288d18.1)

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