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D. rerio Gene: chrna10a - ENSDARG00000011113 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000011113
Namechrna10a
Descriptioncholinergic receptor, nicotinic, alpha 10a [Source:ZFIN;Acc:ZDB-GENE-060503-725]
OrganismDanio rerio (zebrafish)
Synonym(s)chrna10, si:dkey-24p1.3

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
8.54e3
  • 8.54e3
71.40
  • 71.40
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
  • 2.07e4
54.68
  • 54.68
  • 30.81
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
1.74e4
  • 1.74e4
41.72
  • 41.72
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.79e4
  • 1.79e4
39.92
  • 39.92
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.85e4
  • 1.85e4
  • 2.88e4
38.03
  • 38.03
  • 3.49
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSDARG00000011113 (chrna10a)
ZFINZDB-GENE-060503-725 (chrna10a)
EMBLBX072550
Uniprot/SPTREMBLQ1LY90, Q1LY90_DANRE, R4GF05, R4GF05_DANRE

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