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D. rerio Gene: snrpb - ENSDARG00000011125 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000011125
Namesnrpb
Descriptionsmall nuclear ribonucleoprotein polypeptides B and B1 [Source:ZFIN;Acc:ZDB-GENE-040426-1819]
OrganismDanio rerio (zebrafish)
Synonym(s)snrpn, zgc:77315
Orthologs(s)24 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
45.0
  • 45.0
99.85
  • 99.85
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
88.9
  • 88.9
99.71
  • 99.71
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
97.0
  • 97.0
  • 124
  • 767
  • 1.39e3
  • 2.61e3
99.68
  • 99.68
  • 99.59
  • 97.44
  • 95.35
  • 91.25
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
110
  • 110
  • 283
  • 721
  • 735
  • 963
  • 1.00e3
99.64
  • 99.64
  • 99.06
  • 97.59
  • 97.54
  • 96.78
  • 96.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
267
  • 267
  • 398
  • 422
  • 698
  • 759
  • 832
  • 1.01e3
  • 1.05e3
  • 1.19e3
  • 1.25e3
99.11
  • 99.11
  • 98.67
  • 98.59
  • 97.67
  • 97.46
  • 97.22
  • 96.62
  • 96.48
  • 96.03
  • 95.83
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
298
  • 298
99.01
  • 99.01
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
329
  • 329
  • 3.62e3
98.90
  • 98.90
  • 87.89
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
346
  • 346
98.84
  • 98.84
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
362
  • 362
98.79
  • 98.79
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
443
  • 443
98.52
  • 98.52
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
532
  • 532
98.22
  • 98.22
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
550
  • 550
98.16
  • 98.16
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
571
  • 571
  • 854
  • 5.13e3
  • 9.20e3
98.09
  • 98.09
  • 97.14
  • 82.82
  • 69.18
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
591
  • 591
  • 2.22e3
98.02
  • 98.02
  • 92.57
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
647
  • 647
97.84
  • 97.84
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
660
  • 660
97.79
  • 97.79
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
676
  • 676
97.74
  • 97.74
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
695
  • 695
97.68
  • 97.68
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
757
  • 757
97.47
  • 97.47
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
876
  • 876
97.07
  • 97.07
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
988
  • 988
96.69
  • 96.69
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.05e3
  • 1.05e3
96.47
  • 96.47
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000106zygote stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
1.11e3
  • 1.11e3
  • 1.14e3
  • 1.16e3
  • 1.30e3
  • 1.31e3
  • 1.32e3
  • 2.04e3
  • 2.23e3
  • 2.25e3
  • 3.01e3
  • 3.82e3
  • 4.03e3
  • 4.41e3
  • 5.44e3
96.29
  • 96.29
  • 96.20
  • 96.13
  • 95.66
  • 95.63
  • 95.60
  • 93.17
  • 92.54
  • 92.47
  • 89.91
  • 87.20
  • 86.52
  • 85.25
  • 81.78
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.36e3
  • 1.36e3
  • 2.80e3
  • 3.15e3
95.46
  • 95.46
  • 90.61
  • 89.44
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.84e3
  • 1.84e3
93.83
  • 93.83
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
2.10e3
  • 2.10e3
  • 3.05e3
92.97
  • 92.97
  • 89.79
AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
2.32e3
  • 2.32e3
92.23
  • 92.23
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
2.55e3
  • 2.55e3
91.47
  • 91.47
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
2.88e3
  • 2.88e3
  • 3.84e3
90.36
  • 90.36
  • 87.16
AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
3.93e3
  • 3.93e3
86.83
  • 86.83
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.32e3
  • 6.32e3
78.85
  • 78.85
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.57e4
  • 1.57e4
47.56
  • 47.56
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi15 species17 genesCompare expression
Bilateria22 species24 genesCompare expression

Orthology information comes from OMA : ENSDARG00000011125.

Cross-references

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