D. rerio Gene: atp6v1d - ENSDARG00000011175 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000011175
Nameatp6v1d
DescriptionATPase, H+ transporting, lysosomal V1 subunit D [Source:ZFIN;Acc:ZDB-GENE-040426-727]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:55524

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
667
  • 667
  • 1.44e4
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
918
  • 918
  • 2.11e3
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.21e3
  • 1.21e3
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.27e3
  • 1.27e3
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
1.47e3
  • 1.47e3
  • 1.96e3
  • 2.10e3
  • 2.17e3
  • 2.94e3
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.57e3
  • 1.57e3
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.65e3
  • 1.65e3
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.16e3
  • 2.16e3
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.35e3
  • 2.35e3
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.43e3
  • 2.43e3
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
2.47e3
  • 2.47e3
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
3.10e3
  • 3.10e3
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
3.15e3
  • 3.15e3
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
3.33e3
  • 3.33e3
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
3.88e3
  • 3.88e3
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
6.29e3
  • 6.29e3
AEIR
  • AEIR
UBERON:2000098proliferative region
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
9.25e3
  • 9.25e3
  • 1.04e4
AEIR
  • AEIR
  • AEIR
UBERON:2000088YSL
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
9.87e3
  • 9.87e3
  • 1.11e4
  • 1.13e4
  • 1.13e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
1.06e4
  • 1.06e4
  • 1.06e4
  • 1.11e4
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000319mucus secreting cell
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
1.14e4
  • 1.14e4
  • 1.14e4
  • 1.14e4
  • 1.15e4
  • 1.18e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001017central nervous system
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.16e4
  • 1.16e4
  • 1.17e4
  • 1.18e4
  • 1.22e4
  • 1.22e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001905pineal body
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.18e4
  • 1.18e4
  • 1.20e4
  • 1.20e4
  • 1.20e4
  • 1.23e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0008897fin
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation
Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.
Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLAL928824, BC045370
EnsemblENSDARG00000011175 (atp6v1d)
Uniprot/SPTREMBLQ7ZVX8, Q7ZVX8_DANRE
ZFINZDB-GENE-040426-727 (atp6v1d)

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