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D. rerio Gene: ift46 - ENSDARG00000011240 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000011240
Nameift46
Descriptionintraflagellar transport 46 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-080102-3]
OrganismDanio rerio (zebrafish)
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
251
  • 251
  • 1.50e4
99.16
  • 99.16
  • 49.92
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
4.00e3
  • 4.00e3
  • 9.06e3
86.59
  • 86.59
  • 69.66
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
4.29e3
  • 4.29e3
85.63
  • 85.63
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0004707pharyngula stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000031Pharyngula:Prim-25
4.80e3
  • 4.80e3
  • 5.13e3
  • 5.49e3
  • 5.52e3
  • 5.61e3
  • 6.67e3
  • 7.30e3
  • 8.36e3
  • 9.07e3
  • 1.00e4
83.92
  • 83.92
  • 82.82
  • 81.63
  • 81.50
  • 81.23
  • 77.65
  • 75.57
  • 72.02
  • 69.62
  • 66.50
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
5.12e3
  • 5.12e3
  • 7.08e3
  • 8.36e3
  • 8.47e3
82.86
  • 82.86
  • 76.30
  • 72.02
  • 71.63
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
5.86e3
  • 5.86e3
  • 7.42e3
  • 8.06e3
  • 9.53e3
  • 9.55e3
  • 1.01e4
80.37
  • 80.37
  • 75.16
  • 73.01
  • 68.11
  • 68.03
  • 66.21
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000037Larval:Day 5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
5.88e3
  • 5.88e3
  • 6.51e3
  • 6.53e3
  • 6.79e3
  • 6.82e3
  • 7.17e3
  • 7.81e3
  • 7.89e3
  • 8.83e3
  • 8.96e3
  • 8.96e3
  • 9.39e3
  • 9.65e3
  • 9.89e3
  • 1.00e4
  • 1.43e4
  • 1.46e4
80.32
  • 80.32
  • 78.20
  • 78.15
  • 77.27
  • 77.17
  • 75.98
  • 73.85
  • 73.58
  • 70.43
  • 69.99
  • 69.99
  • 68.57
  • 67.69
  • 66.89
  • 66.46
  • 51.99
  • 51.01
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000104life cycle
5.99e3
  • 5.99e3
  • 7.16e3
  • 1.34e4
  • 1.45e4
79.94
  • 79.94
  • 76.04
  • 54.99
  • 51.33
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
6.42e3
  • 6.42e3
  • 8.47e3
  • 1.09e4
78.51
  • 78.51
  • 71.63
  • 63.45
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
6.62e3
  • 6.62e3
77.85
  • 77.85
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
6.81e3
  • 6.81e3
  • 9.79e3
77.19
  • 77.19
  • 67.21
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.61e3
  • 7.61e3
74.51
  • 74.51
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.62e3
  • 7.62e3
74.48
  • 74.48
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
8.20e3
  • 8.20e3
72.54
  • 72.54
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
8.45e3
  • 8.45e3
71.70
  • 71.70
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
8.48e3
  • 8.48e3
71.62
  • 71.62
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
8.65e3
  • 8.65e3
71.02
  • 71.02
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
8.72e3
  • 8.72e3
70.82
  • 70.82
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
9.03e3
  • 9.03e3
69.76
  • 69.76
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
9.28e3
  • 9.28e3
  • 9.64e3
68.91
  • 68.91
  • 67.73
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000011Blastula:1k-cell
9.39e3
  • 9.39e3
  • 1.02e4
  • 1.06e4
  • 1.07e4
  • 1.08e4
68.55
  • 68.55
  • 65.76
  • 64.43
  • 64.30
  • 63.89
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
9.78e3
  • 9.78e3
67.27
  • 67.27
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
9.92e3
  • 9.92e3
66.78
  • 66.78
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.33
  • 66.33
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.01
  • 64.01
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.73
  • 62.73
AEIR
  • AEIR
UBERON:2007042spinal cord neural tube
  • ZFS:0000027Segmentation:20-25 somites
1.12e4
  • 1.12e4
62.50
  • 62.50
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.22
  • 62.22
AEIR
  • AEIR
ZFA:0000023forerunner cell group (Danio)
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
1.21e4
  • 1.21e4
  • 1.28e4
59.36
  • 59.36
  • 57.13
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.14
  • 59.14
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.27e4
  • 1.27e4
57.55
  • 57.55
AEIR
  • AEIR
UBERON:0000151pectoral fin
  • ZFS:0000031Pharyngula:Prim-25
1.28e4
  • 1.28e4
57.13
  • 57.13
AEIR
  • AEIR
UBERON:0002240spinal cord
  • ZFS:0000029Pharyngula:Prim-5
1.28e4
  • 1.28e4
57.11
  • 57.11
AEIR
  • AEIR
UBERON:0003051ear vesicle
  • ZFS:0000031Pharyngula:Prim-25
1.29e4
  • 1.29e4
56.79
  • 56.79
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
56.59
  • 56.59
AEIR
  • AEIR
UBERON:0003060pronephric duct
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
1.34e4
  • 1.34e4
  • 1.34e4
54.97
  • 54.97
  • 54.97
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.88
  • 50.88
AEIR
  • AEIR
CL:0000856neuromast hair cell
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000036Larval:Day 4
1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0001707nasal cavity
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000036Larval:Day 4
1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
48.77
  • 48.77
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Cross-references

EnsemblENSDARG00000011240 (ift46)
ZFINZDB-GENE-080102-3 (ift46)
EMBLCU861448
Uniprot/SPTREMBLF1QMN4, F1QMN4_DANRE, F8W2W9, F8W2W9_DANRE

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