D. rerio Gene: ift46 - ENSDARG00000011240 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000011240
Nameift46
Descriptionintraflagellar transport 46 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-080102-3]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
251
  • 251
  • 1.48e4
99.15352
  • 99.15352
  • 49.91550
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
4.00e3
  • 4.00e3
  • 9.06e3
86.46830
  • 86.46830
  • 69.37455
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
4.29e3
  • 4.29e3
85.49707
  • 85.49707
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000031Pharyngula:Prim-25
4.79e3
  • 4.79e3
  • 5.10e3
  • 5.49e3
  • 5.60e3
  • 6.40e3
  • 6.67e3
  • 7.30e3
  • 8.30e3
  • 9.01e3
  • 9.93e3
83.81062
  • 83.81062
  • 82.77840
  • 81.46236
  • 81.07865
  • 78.37865
  • 77.44606
  • 75.34348
  • 71.96042
  • 69.55138
  • 66.43009
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
5.08e3
  • 5.08e3
  • 7.03e3
  • 8.30e3
82.82736
  • 82.82736
  • 76.24365
  • 71.95635
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
5.84e3
  • 5.84e3
  • 6.46e3
  • 6.48e3
  • 6.73e3
  • 6.77e3
  • 7.12e3
  • 7.75e3
  • 7.84e3
  • 8.77e3
  • 8.88e3
  • 8.90e3
  • 9.32e3
  • 9.58e3
  • 9.82e3
  • 9.95e3
  • 1.42e4
  • 1.45e4
80.27326
  • 80.27326
  • 78.15586
  • 78.09861
  • 77.26767
  • 77.12424
  • 75.93137
  • 73.79709
  • 73.52105
  • 70.36271
  • 69.98817
  • 69.92822
  • 68.50528
  • 67.62109
  • 66.81579
  • 66.38460
  • 51.99138
  • 51.00857
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
6.57e3
  • 6.57e3
77.79707
  • 77.79707
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000104life cycle
7.10e3
  • 7.10e3
  • 7.46e3
  • 1.33e4
  • 1.44e4
75.99083
  • 75.99083
  • 74.78146
  • 54.98815
  • 51.33311
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.57e3
  • 7.57e3
74.42803
  • 74.42803
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
8.00e3
  • 8.00e3
  • 9.41e3
  • 9.46e3
  • 9.48e3
  • 1.00e4
72.94874
  • 72.94874
  • 68.19455
  • 68.03846
  • 67.96059
  • 66.14044
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
8.14e3
  • 8.14e3
72.48421
  • 72.48421
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
8.20e3
  • 8.20e3
72.28310
  • 72.28310
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
8.39e3
  • 8.39e3
71.63690
  • 71.63690
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
8.48e3
  • 8.48e3
71.35518
  • 71.35518
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
8.65e3
  • 8.65e3
70.75355
  • 70.75355
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
8.72e3
  • 8.72e3
70.54607
  • 70.54607
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
9.03e3
  • 9.03e3
69.47932
  • 69.47932
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
9.22e3
  • 9.22e3
  • 9.57e3
68.84565
  • 68.84565
  • 67.65567
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
9.82e3
  • 9.82e3
  • 1.02e4
  • 1.08e4
66.80459
  • 66.80459
  • 65.40003
  • 63.37181
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
9.92e3
  • 9.92e3
66.47457
  • 66.47457
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
9.98e3
  • 9.98e3
66.28657
  • 66.28657
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
9.98e3
  • 9.98e3
66.28530
  • 66.28530
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.01491
  • 66.01491
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
1.02e4
  • 1.02e4
  • 1.05e4
  • 1.06e4
65.68759
  • 65.68759
  • 64.35405
  • 64.22727
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
63.67262
  • 63.67262
AEIR
  • AEIR
UBERON:2007042spinal cord neural tube
  • ZFS:0000027Segmentation:20-25 somites
1.11e4
  • 1.11e4
62.49830
  • 62.49830
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.38149
  • 62.38149
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.12525
  • 62.12525
AEIR
  • AEIR
ZFA:0000023forerunner cell group (Danio)
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
1.20e4
  • 1.20e4
  • 1.27e4
59.35640
  • 59.35640
  • 57.12595
AEIR
  • AEIR
  • AEIR
UBERON:0000151pectoral fin
  • ZFS:0000031Pharyngula:Prim-25
1.27e4
  • 1.27e4
57.12595
  • 57.12595
AEIR
  • AEIR
UBERON:0002240spinal cord
  • ZFS:0000029Pharyngula:Prim-5
1.27e4
  • 1.27e4
57.10567
  • 57.10567
AEIR
  • AEIR
UBERON:0003051ear vesicle
  • ZFS:0000031Pharyngula:Prim-25
1.28e4
  • 1.28e4
56.78945
  • 56.78945
AEIR
  • AEIR
UBERON:0003060pronephric duct
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
1.33e4
  • 1.33e4
  • 1.33e4
54.97294
  • 54.97294
  • 54.97294
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.42333
  • 50.42333
AEIR
  • AEIR
CL:0000856neuromast hair cell
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000036Larval:Day 4
1.48e4
  • 1.48e4
  • 1.48e4
50.00169
  • 50.00169
  • 50.00169
AEIR
  • AEIR
  • AEIR
UBERON:0001707nasal cavity
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000036Larval:Day 4
1.48e4
  • 1.48e4
  • 1.48e4
50.00169
  • 50.00169
  • 50.00169
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLCU861448
EnsemblENSDARG00000011240 (ift46)
Uniprot/SPTREMBLF1QMN4, F1QMN4_DANRE, F8W2W9, F8W2W9_DANRE
ZFINZDB-GENE-080102-3 (ift46)

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