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D. rerio Gene: adra1ba - ENSDARG00000011317 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000011317
Nameadra1ba
Descriptionadrenoceptor alpha 1Ba [Source:ZFIN;Acc:ZDB-GENE-120510-1]
OrganismDanio rerio (zebrafish)
Orthologs(s)17 orthologs
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.18e4
  • 1.18e4
  • 1.26e4
  • 1.43e4
  • 2.01e4
  • 2.24e4
60.35
  • 60.35
  • 57.68
  • 52.20
  • 32.85
  • 24.83
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.44e4
  • 1.44e4
  • 2.22e4
51.85
  • 51.85
  • 25.52
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.54e4
  • 1.54e4
48.42
  • 48.42
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.64e4
  • 1.64e4
45.08
  • 45.08
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.69e4
  • 1.69e4
43.34
  • 43.34
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.72e4
  • 1.72e4
42.44
  • 42.44
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.75e4
  • 1.75e4
41.46
  • 41.46
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.91e4
  • 1.91e4
35.91
  • 35.91
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.00e4
  • 2.00e4
33.17
  • 33.17
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.15e4
  • 2.15e4
28.07
  • 28.07
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.20e4
  • 2.20e4
26.21
  • 26.21
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.22e4
  • 2.22e4
25.64
  • 25.64
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
2.22e4
  • 2.22e4
25.59
  • 25.59
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
2.22e4
  • 2.22e4
25.51
  • 25.51
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Clupeocephala1 geneCompare expression
Chordata4 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000011317.

Cross-references

EnsemblENSDARG00000011317 (adra1ba)
ZFINZDB-GENE-120510-1 (adra1ba)
Uniprot/SPTREMBLF1QLK8, F1QLK8_DANRE

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