D. rerio Gene: ncaldb - ENSDARG00000011334 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000011334
Namencaldb
Descriptionneurocalcin delta b [Source:ZFIN;Acc:ZDB-GENE-040808-37]
OrganismDanio rerio (zebrafish)
Synonym(s)ncald, zgc:100982
Orthologs(s)6 orthologs
Paralog(s)49 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
575
  • 575
  • 1.46e4
98.08
  • 98.08
  • 51.07
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
623
  • 623
97.92
  • 97.92
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.09e3
  • 1.09e3
  • 4.50e3
96.35
  • 96.35
  • 84.94
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
3.26e3
  • 3.26e3
89.09
  • 89.09
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
3.34e3
  • 3.34e3
  • 1.54e4
  • 1.58e4
  • 1.82e4
  • 2.05e4
88.82
  • 88.82
  • 48.37
  • 47.20
  • 39.09
  • 31.48
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
4.60e3
  • 4.60e3
  • 1.73e4
84.61
  • 84.61
  • 41.91
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
4.69e3
  • 4.69e3
84.30
  • 84.30
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.70e3
  • 4.70e3
84.26
  • 84.26
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
5.53e3
  • 5.53e3
  • 1.43e4
81.49
  • 81.49
  • 52.07
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
5.53e3
  • 5.53e3
81.48
  • 81.48
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
6.43e3
  • 6.43e3
78.48
  • 78.48
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
8.55e3
  • 8.55e3
71.39
  • 71.39
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.54
  • 65.54
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.49
  • 60.49
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.48
  • 60.48
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.27e4
  • 1.27e4
57.34
  • 57.34
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
54.53
  • 54.53
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.45e4
  • 1.45e4
51.31
  • 51.31
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
1.46e4
  • 1.46e4
  • 1.50e4
51.12
  • 51.12
  • 49.80
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
48.35
  • 48.35
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.71e4
  • 1.71e4
42.85
  • 42.85
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.83e4
  • 1.83e4
38.75
  • 38.75
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Bilateria6 species6 genesCompare expression

Orthology information comes from OMA : ENSDARG00000011334.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata3 genesCompare expression
Opisthokonta5 genesCompare expression
Eukaryota49 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000011334.

Cross-references

EnsemblENSDARG00000011334 (ncaldb)
ZFINZDB-GENE-040808-37 (ncaldb)
EMBLBC079490, BX294657
Uniprot/SWISSPROTNCLDB_DANRE, Q6AXL4

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